Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | AAIA70_RS04420 | Genome accession | NZ_CP154264 |
| Coordinates | 954476..954775 (+) | Length | 99 a.a. |
| NCBI ID | WP_005446580.1 | Uniprot ID | A0A3A1QB85 |
| Organism | Vibrio harveyi strain 45T2 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 949476..959775
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAIA70_RS04410 (AAIA70_04410) | - | 951983..952255 (+) | 273 | WP_005430934.1 | HU family DNA-binding protein | - |
| AAIA70_RS04415 (AAIA70_04415) | ppiD | 952471..954330 (+) | 1860 | WP_009698342.1 | peptidylprolyl isomerase | - |
| AAIA70_RS04420 (AAIA70_04420) | comEA | 954476..954775 (+) | 300 | WP_005446580.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| AAIA70_RS04425 (AAIA70_04425) | rrtA | 954928..955479 (-) | 552 | WP_017818999.1 | rhombosortase | - |
| AAIA70_RS04430 (AAIA70_04430) | - | 955483..956151 (+) | 669 | WP_343291237.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| AAIA70_RS04435 (AAIA70_04435) | - | 956137..957471 (-) | 1335 | WP_050548759.1 | anti-phage deoxyguanosine triphosphatase | - |
| AAIA70_RS04440 (AAIA70_04440) | yfbR | 957475..958059 (-) | 585 | WP_005425568.1 | 5'-deoxynucleotidase | - |
| AAIA70_RS04445 (AAIA70_04445) | - | 958143..959357 (-) | 1215 | WP_005446588.1 | pyridoxal phosphate-dependent aminotransferase | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10936.80 Da Isoelectric Point: 8.9385
>NTDB_id=992779 AAIA70_RS04420 WP_005446580.1 954476..954775(+) (comEA) [Vibrio harveyi strain 45T2]
MKWMLTLCLLLLAPMSWAEESKSANTKAAKYEGIEITVNVNTASAQEIATMLKGIGEKKAKDIVEYRNEHGPFKTVADLT
KVKGIGDATVKKNEERILL
MKWMLTLCLLLLAPMSWAEESKSANTKAAKYEGIEITVNVNTASAQEIATMLKGIGEKKAKDIVEYRNEHGPFKTVADLT
KVKGIGDATVKKNEERILL
Nucleotide
Download Length: 300 bp
>NTDB_id=992779 AAIA70_RS04420 WP_005446580.1 954476..954775(+) (comEA) [Vibrio harveyi strain 45T2]
ATGAAATGGATGTTAACACTGTGCTTATTACTCTTAGCACCGATGAGCTGGGCAGAAGAGAGTAAGTCGGCTAACACAAA
AGCAGCTAAGTACGAAGGTATCGAGATTACGGTAAACGTAAATACAGCTTCAGCGCAAGAGATTGCCACCATGCTAAAGG
GTATTGGTGAGAAAAAAGCGAAAGATATCGTCGAATATCGTAATGAACACGGTCCTTTTAAAACCGTTGCGGATCTGACC
AAAGTGAAGGGCATTGGCGATGCCACGGTGAAAAAGAATGAAGAGCGTATTTTGTTGTAA
ATGAAATGGATGTTAACACTGTGCTTATTACTCTTAGCACCGATGAGCTGGGCAGAAGAGAGTAAGTCGGCTAACACAAA
AGCAGCTAAGTACGAAGGTATCGAGATTACGGTAAACGTAAATACAGCTTCAGCGCAAGAGATTGCCACCATGCTAAAGG
GTATTGGTGAGAAAAAAGCGAAAGATATCGTCGAATATCGTAATGAACACGGTCCTTTTAAAACCGTTGCGGATCTGACC
AAAGTGAAGGGCATTGGCGATGCCACGGTGAAAAAGAATGAAGAGCGTATTTTGTTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio campbellii strain DS40M4 |
82.828 |
100 |
0.828 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
75.758 |
100 |
0.758 |
| comEA | Vibrio cholerae C6706 |
56.566 |
100 |
0.566 |
| comEA | Vibrio cholerae strain A1552 |
56.566 |
100 |
0.566 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
41.071 |
100 |
0.465 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
39.252 |
100 |
0.424 |
| comEA | Legionella pneumophila str. Paris |
37.374 |
100 |
0.374 |
| comEA | Legionella pneumophila strain ERS1305867 |
37.374 |
100 |
0.374 |