Detailed information NTG0992774

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AAIA70_RS01145
• Genome accession: NZ_CP154264
• Coordinates: 257092..258099 (-)
• Length: 335 a.a.
• NCBI ID: WP_005450580.1
• Uniprot ID: K5TI37
• Organism: Vibrio harveyi strain 45T2
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 252092..263099

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAIA70_RS01125 (AAIA70_01125)	-	252658..253575 (-)	918	WP_005450584.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AAIA70_RS01130 (AAIA70_01130)	hslU	253884..255215 (-)	1332	WP_009698879.1	HslU--HslV peptidase ATPase subunit	-
AAIA70_RS01135 (AAIA70_01135)	hslV	255245..255796 (-)	552	WP_009698878.1	ATP-dependent protease subunit HslV	-
AAIA70_RS01140 (AAIA70_01140)	-	256382..256927 (-)	546	WP_005450581.1	SPOR domain-containing protein	-
AAIA70_RS01145 (AAIA70_01145)	cytR	257092..258099 (-)	1008	WP_005450580.1	DNA-binding transcriptional regulator CytR	Regulator
AAIA70_RS01150 (AAIA70_01150)	priA	258306..260507 (-)	2202	WP_343291125.1	primosomal protein N'	-
AAIA70_RS01155 (AAIA70_01155)	rpmE	260804..261025 (+)	222	WP_005450576.1	50S ribosomal protein L31	-
AAIA70_RS01160 (AAIA70_01160)	rpsJ	261482..261793 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
AAIA70_RS01165 (AAIA70_01165)	rplC	261808..262437 (+)	630	WP_005435072.1	50S ribosomal protein L3	-
AAIA70_RS01170 (AAIA70_01170)	rplD	262455..263057 (+)	603	WP_005435074.1	50S ribosomal protein L4	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36918.48 Da
• Isoelectric Point: 5.9796

>NTDB_id=992774 AAIA70_RS01145 WP_005450580.1 257092..258099(-) (cytR) [Vibrio harveyi strain 45T2]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKEEQYSIVADFSFEGGVQAVRKLLELPEPPTA
LFCHCDTMAIGAIQEAKRLGLRIPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPPLR

Nucleotide

• Length: 1008 bp

>NTDB_id=992774 AAIA70_RS01145 WP_005450580.1 257092..258099(-) (cytR) [Vibrio harveyi strain 45T2]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGGGTATCTACTGCTACGGTATCGCGAGCATTAATGAATCCAGAAAA
AGTCTCTTCATCAACAAGAAAGAGAGTGGAAGATGCCGTACTTGAAGCTGGTTATTCACCGAATTCATTAGCTCGTAATT
TACGTAGAAATGAATCAAAGACCATTGTCACTATCGTACCGGACATATGCGATCCGTATTTCTCTGAAATCATTCGCGGT
ATCGAAGATGCAGCAATGGAACACGGTTACCTAGTTCTTCTCGGCGATAGCGGTCAGCAGAAAAAGCGCGAAAGCTCATT
CGTAAACTTAGTATTCACCAAGCAAGCTGATGGCATGTTACTACTGGGCACCGACTTACCATTTGATGTCAGCAAGCCAG
AGCAGAAAAACCTACCACCAATGGTCATGGCGTGCGAATTCGCTCCTGAGCTGGAACTACCAACGGTGCATATCGATAAC
TTGACCTCTGCATTTGAAGCCGTGAACTACCTGACGCAACTTGGTCACAAGCGTATTGCTCAGATCTCCGGTCCAGATAC
TGCGGTGCTGTGCCAGTTCCGCCAACAAGGTTACCAACAAGCACTTCGCCGTGCTGGTATTAGTAAAGAAGAGCAATACA
GCATTGTGGCTGACTTCTCTTTCGAAGGTGGCGTTCAAGCCGTACGCAAACTTCTCGAATTGCCTGAACCACCAACCGCT
CTATTCTGTCACTGCGACACCATGGCGATTGGTGCTATCCAAGAAGCGAAACGTCTTGGTCTGCGTATTCCGCAGGATTT
ATCGGTTGTCGGCTTTGATGATATTCAATTCGCGCAATACTGCGATCCACCGTTAACCACCATCTCTCAACCACGTTATG
AGATTGGTCGCCAAGCAATGTTAATGATGCTAGAGCTACTGAAAGGTCACGATGTGCACTCAGGCTCTCGCTTACTTGAA
ACTAAATTAGTTGTGCGTGGTAGTGCAGCGCCACCACCTTTGCGCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: K5TI37

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	96.386	99.104	0.955
cytR	Vibrio cholerae C6706	90.663	99.104	0.899