Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ABR2090_RS05355 Genome accession   NZ_LN868200
Coordinates   1123735..1124676 (+) Length   313 a.a.
NCBI ID   WP_001210792.1    Uniprot ID   A0A077GHT6
Organism   Acinetobacter baumannii isolate R2090     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1118735..1129676
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABR2090_RS05345 (ABR2090_1071) basA 1119158..1121005 (+) 1848 WP_000910262.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -
  ABR2090_RS05350 (ABR2090_1072) basB 1121076..1123103 (-) 2028 WP_000939848.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  ABR2090_RS05355 (ABR2090_1074) ceuB 1123735..1124676 (+) 942 WP_001210792.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  ABR2090_RS05360 (ABR2090_1075) bauC 1124676..1125623 (+) 948 WP_001223281.1 ferric acinetobactin ABC transporter permease subunit BauC -
  ABR2090_RS05365 (ABR2090_1076) bauE 1125620..1126390 (+) 771 WP_000582124.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  ABR2090_RS05370 (ABR2090_1077) bauB 1126397..1127365 (+) 969 WP_001104132.1 siderophore-binding periplasmic lipoprotein BauB -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 33993.06 Da        Isoelectric Point: 8.6941

>NTDB_id=992235 ABR2090_RS05355 WP_001210792.1 1123735..1124676(+) (ceuB) [Acinetobacter baumannii isolate R2090]
MRFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLVCDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=992235 ABR2090_RS05355 WP_001210792.1 1123735..1124676(+) (ceuB) [Acinetobacter baumannii isolate R2090]
ATGCGATTTGGCTTATTCTGTATTTTTATCATTTTATGTATTTGTTCGTTATTGCTTGGGGCTGAGCAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTAATTACCATTGTGCTTA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACATCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCATTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCTAGCTTAATTTATATCGCAATTATTCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTTATTGGCTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTCGCACACCGCTTTACCGTGATTGGTATGGGTGAAGAGATGGCTTCTAGCTTAGGTCTCA
GTTATGCAGCTATAGCCGCGATTGGTTTGATACTGGTTGCTATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTGGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCCATTGTGGC
TTTGGGTGGGGCATCTCTATTACTGGTTTGCGACATTCTTGGCCGCTCAATCATTTACCCATTTGAAGTGCCAATTGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A077GHT6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.595

94.569

0.422