Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ABCIP7010_RS12990 Genome accession   NZ_LN865143
Coordinates   2791918..2792859 (-) Length   313 a.a.
NCBI ID   WP_031965228.1    Uniprot ID   -
Organism   Acinetobacter baumannii isolate CIP70.10     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2786918..2797859
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABCIP7010_RS12975 (ABCIP7010_2624) bauB 2789229..2790197 (-) 969 WP_001104125.1 siderophore-binding periplasmic lipoprotein BauB -
  ABCIP7010_RS12980 (ABCIP7010_2625) bauE 2790204..2790974 (-) 771 WP_031965229.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  ABCIP7010_RS12985 (ABCIP7010_2626) bauC 2790971..2791918 (-) 948 WP_001223282.1 ferric acinetobactin ABC transporter permease subunit BauC -
  ABCIP7010_RS12990 (ABCIP7010_2627) ceuB 2791918..2792859 (-) 942 WP_031965228.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  ABCIP7010_RS19260 (ABCIP7010_2628) - 2792859..2792990 (-) 132 WP_001218004.1 hypothetical protein -
  ABCIP7010_RS12995 (ABCIP7010_2630) basB 2793491..2795518 (+) 2028 WP_087937500.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  ABCIP7010_RS13000 (ABCIP7010_2631) basA 2795589..2797436 (-) 1848 WP_031965226.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 33989.07 Da        Isoelectric Point: 8.4665

>NTDB_id=992176 ABCIP7010_RS12990 WP_031965228.1 2791918..2792859(-) (ceuB) [Acinetobacter baumannii isolate CIP70.10]
MQFGLFCIFILLCICSLLLGAEQIQWPTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=992176 ABCIP7010_RS12990 WP_031965228.1 2791918..2792859(-) (ceuB) [Acinetobacter baumannii isolate CIP70.10]
ATGCAATTCGGCTTATTTTGTATTTTTATCCTTTTATGTATTTGCTCGTTATTGCTCGGGGCTGAGCAAATACAGTGGCC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTAATTACTATTGTGCTTA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAACATATTGTGCGTAACAAGTTTGTTGAACCGGAAACATCGGGC
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCATTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGGCGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTTATTGGCTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTCGCACACCGCTTTACCGTAATTGGTATGGGGGAAGAGATGGCTTCTAGTTTGGGACTCA
GTTATGCAGCTATAGCCGCCATTGGTTTGATACTGGTTGCCATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCGATTGTGGC
TTTGGGTGGGGCATCTCTATTACTGATTTGTGACATTCTTGGCCGCTCAATCATTTACCCATTTGAAGTGCCGATCGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419

Multiple sequence alignment