Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SABB155_RS09275 Genome accession   NZ_LN854556
Coordinates   1888463..1889203 (-) Length   246 a.a.
NCBI ID   WP_054189560.1    Uniprot ID   -
Organism   Staphylococcus aureus strain BB155     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1883463..1894203
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SABB155_RS09250 (SABB155_17180) hemH 1884341..1885264 (-) 924 WP_054189562.1 ferrochelatase -
  SABB155_RS09255 (SABB155_17190) hemE 1885322..1886359 (-) 1038 WP_000233540.1 uroporphyrinogen decarboxylase -
  SABB155_RS09260 - 1886349..1886435 (-) 87 WP_223810123.1 hypothetical protein -
  SABB155_RS09265 (SABB155_17200) traP 1886620..1887123 (+) 504 WP_000737983.1 signal transduction protein TRAP -
  SABB155_RS09270 (SABB155_17210) ecsB 1887247..1888470 (-) 1224 WP_054189561.1 ABC transporter permease EcsB -
  SABB155_RS09275 (SABB155_17220) pptA 1888463..1889203 (-) 741 WP_054189560.1 ABC transporter ATP-binding protein EcsA Regulator
  SABB155_RS09280 (SABB155_17230) - 1889337..1889759 (+) 423 WP_000004981.1 HIT family protein -
  SABB155_RS09285 (SABB155_17240) - 1889901..1890266 (+) 366 WP_054189559.1 YtxH domain-containing protein -
  SABB155_RS09290 (SABB155_17250) - 1891000..1891557 (+) 558 WP_054189558.1 DUF3267 domain-containing protein -
  SABB155_RS09295 (SABB155_17260) - 1891761..1892723 (+) 963 WP_054189557.1 foldase protein PrsA -
  SABB155_RS09300 (SABB155_17270) yhaM 1892844..1893785 (-) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27633.97 Da        Isoelectric Point: 4.5965

>NTDB_id=992109 SABB155_RS09275 WP_054189560.1 1888463..1889203(-) (pptA) [Staphylococcus aureus strain BB155]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDCDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=992109 SABB155_RS09275 WP_054189560.1 1888463..1889203(-) (pptA) [Staphylococcus aureus strain BB155]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTTAATGGCGCCGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATTG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545

Multiple sequence alignment