Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   A66_RS05260 Genome accession   NZ_LN847353
Coordinates   1018073..1018537 (-) Length   154 a.a.
NCBI ID   WP_001135783.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain A66     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1013073..1023537
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A66_RS05240 (A66_01048) - 1014025..1014993 (-) 969 WP_053039610.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -
  A66_RS05245 (A66_01049) pdrM 1015122..1016507 (-) 1386 WP_053039611.1 sodium-coupled multidrug efflux MATE transporter PdrM -
  A66_RS05250 - 1016518..1016778 (-) 261 WP_001105923.1 hypothetical protein -
  A66_RS05255 (A66_01050) - 1016792..1018060 (-) 1269 WP_000924490.1 dihydroorotase -
  A66_RS05260 (A66_01051) mutX 1018073..1018537 (-) 465 WP_001135783.1 8-oxo-dGTP diphosphatase Machinery gene
  A66_RS05265 (A66_01052) - 1018547..1019200 (-) 654 WP_053039612.1 uracil-DNA glycosylase -
  A66_RS05270 (A66_01053) - 1019336..1019938 (-) 603 WP_014931947.1 hypothetical protein -
  A66_RS05275 (A66_01054) - 1019996..1020709 (-) 714 WP_000499429.1 YjjG family noncanonical pyrimidine nucleotidase -
  A66_RS05280 (A66_01055) dhaM 1021174..1021554 (-) 381 WP_053039613.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  A66_RS12880 - 1021554..1021628 (-) 75 Protein_1044 dihydroxyacetone kinase subunit L -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17840.21 Da        Isoelectric Point: 4.2287

>NTDB_id=991971 A66_RS05260 WP_001135783.1 1018073..1018537(-) (mutX) [Streptococcus pneumoniae strain A66]
MPQLATICYIDNGKELLMLHRNKKPNDVHEGKWIGVGGKLERGETPQECAVREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=991971 A66_RS05260 WP_001135783.1 1018073..1018537(-) (mutX) [Streptococcus pneumoniae strain A66]
ATGCCTCAGTTAGCGACGATTTGCTACATTGATAATGGGAAAGAACTGCTCATGCTCCATCGTAATAAGAAACCCAATGA
TGTCCATGAAGGGAAATGGATTGGTGTGGGTGGTAAGCTAGAGAGAGGAGAAACGCCCCAGGAATGCGCGGTGCGTGAAA
TCCTTGAAGAAACAGGGCTCAAAGCCAAGCCAGTTCTAAAAGGTGTCATCACTTTTCCTGAATTTACACCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACGGAGTTTGAGGGCGACTTGATTGACTGCAATGAGGGGACGCTAGAATGGGTTCC
CTATGATGAGGTTTTGAGCAAGCCGACTTGGGAAGGTGACCACACCTTTGTTGAGTGGCTTTTAGAGGATAAACCCTTCT
TTTCAGCCAAGTTTGTTTATGATGGGGATAAATTGTTGGATACCCAAGTTGATTTCTATGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

99.351

100

0.994

Multiple sequence alignment