Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   A66_RS02660 Genome accession   NZ_LN847353
Coordinates   504457..504723 (+) Length   88 a.a.
NCBI ID   WP_001808618.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain A66     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 499457..509723
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A66_RS02630 (A66_00525) - 500066..501070 (-) 1005 WP_000491761.1 endonuclease/exonuclease/phosphatase family protein -
  A66_RS02635 (A66_00526) - 501091..501774 (-) 684 WP_000743644.1 DUF6973 domain-containing protein -
  A66_RS02640 - 502046..502555 (-) 510 WP_001066469.1 hypothetical protein -
  A66_RS02645 (A66_00527) - 502793..503674 (+) 882 WP_053039493.1 helix-turn-helix transcriptional regulator -
  A66_RS10770 - 503929..504332 (+) 404 Protein_522 helix-turn-helix domain-containing protein -
  A66_RS02660 (A66_00530) HI0659 504457..504723 (+) 267 WP_001808618.1 helix-turn-helix domain-containing protein Machinery gene
  A66_RS02665 (A66_00531) metE 504984..507233 (+) 2250 WP_024478134.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  A66_RS02670 (A66_00532) metF 507297..508163 (+) 867 WP_016569606.1 methylenetetrahydrofolate reductase [NAD(P)H] -
  A66_RS12840 - 508345..508617 (-) 273 WP_000857732.1 hypothetical protein -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9622.15 Da        Isoelectric Point: 4.4893

>NTDB_id=991950 A66_RS02660 WP_001808618.1 504457..504723(+) (HI0659) [Streptococcus pneumoniae strain A66]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGISQPVIARMETGKTSPQLDTVLKVLASLGKTLAI
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=991950 A66_RS02660 WP_001808618.1 504457..504723(+) (HI0659) [Streptococcus pneumoniae strain A66]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAAAGACTAGTCCTCAGTTGGATACAGTCTTAAAAGTCCTAGCCAGTTTAGGAAAGACACTAGCAATC
GTCCCACTTGAACAGGGAAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(29-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

61.039

87.5

0.534