Detailed information NTG0099184

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: QMF30_RS08975
• Genome accession: NZ_AP026974
• Coordinates: 1800410..1801300 (+)
• Length: 296 a.a.
• NCBI ID: WP_281745177.1
• Uniprot ID: -
• Organism: Polynucleobacter yangtzensis strain KF032
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1795410..1806300

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMF30_RS08945 (PKF032_17400)	pth	1795592..1796182 (+)	591	WP_068319644.1	aminoacyl-tRNA hydrolase	-
QMF30_RS08950 (PKF032_17410)	-	1796200..1796466 (-)	267	WP_068319646.1	YfhL family 4Fe-4S dicluster ferredoxin	-
QMF30_RS08955 (PKF032_17420)	coaD	1796492..1796989 (-)	498	WP_068319648.1	pantetheine-phosphate adenylyltransferase	-
QMF30_RS08960 (PKF032_17430)	rsmD	1797026..1797622 (-)	597	WP_281745173.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
QMF30_RS08965 (PKF032_17440)	-	1797645..1798970 (-)	1326	WP_281745175.1	pitrilysin family protein	-
QMF30_RS08970 (PKF032_17450)	-	1798982..1800346 (-)	1365	WP_281745176.1	pitrilysin family protein	-
QMF30_RS08975 (PKF032_17460)	pilA	1800410..1801300 (+)	891	WP_281745177.1	signal recognition particle-docking protein FtsY	Machinery gene
QMF30_RS08980 (PKF032_17470)	rpoH	1801472..1802317 (+)	846	WP_281743675.1	RNA polymerase sigma factor RpoH	-
QMF30_RS08985 (PKF032_17480)	-	1802353..1802937 (-)	585	WP_281745178.1	SCO family protein	-
QMF30_RS08990 (PKF032_17490)	cyoE	1802945..1803838 (-)	894	WP_281745179.1	heme o synthase	-
QMF30_RS08995 (PKF032_17500)	-	1803841..1804962 (-)	1122	WP_281745180.1	COX15/CtaA family protein	-
QMF30_RS09000 (PKF032_17510)	-	1804962..1805618 (-)	657	WP_281745181.1	hypothetical protein	-

Sequence

Protein

• Length: 296 a.a.
• Molecular weight: 31349.84 Da
• Isoelectric Point: 7.0546

>NTDB_id=99184 QMF30_RS08975 WP_281745177.1 1800410..1801300(+) (pilA) [Polynucleobacter yangtzensis strain KF032]
MFGLRKTLGSLFKSSKIDESWFDTLEESLIQSDVGLPTTEQLISKLRKSAKSEKASSPEELQALLIQEVSSLLTAIEPSP
NPLFTSDKPNTPEVWLVVGVNGAGKTTTIGKLCRLFRSQGKSVLLAAGDTFRAAARNQLQEWGGRNQVDVITQEGGDAAA
VAHDAIHAAISRKNDILIIDTAGRLATQDNLMEELKKVKRVIGKALPGAPHHTLLVLDGNTGQNGLSQVKAFHAALGLTG
IIVTKLDGTAKGGVICALAHTLQEGPKPAVLALGKGEGIDDLAPFTAGQYSSELFN

Nucleotide

• Length: 891 bp

>NTDB_id=99184 QMF30_RS08975 WP_281745177.1 1800410..1801300(+) (pilA) [Polynucleobacter yangtzensis strain KF032]
ATGTTCGGCTTACGTAAAACCCTCGGATCCCTTTTCAAATCAAGCAAGATTGATGAATCTTGGTTTGACACTTTGGAAGA
ATCGCTAATACAAAGTGATGTGGGCCTTCCTACGACCGAACAACTCATCAGCAAACTACGTAAATCAGCAAAATCAGAGA
AGGCCTCCAGCCCCGAAGAGTTGCAAGCGCTCCTTATTCAGGAAGTTAGCTCATTACTCACTGCTATTGAGCCTTCACCA
AACCCACTCTTTACTAGTGATAAGCCTAACACTCCAGAGGTATGGTTAGTTGTAGGGGTAAACGGCGCCGGCAAGACTAC
AACTATTGGCAAACTCTGCCGACTCTTTCGGTCTCAAGGTAAATCAGTTCTCCTAGCTGCTGGAGACACCTTCAGAGCCG
CCGCACGTAATCAGCTTCAAGAGTGGGGTGGACGCAATCAAGTGGATGTCATCACCCAGGAAGGTGGTGACGCTGCCGCC
GTAGCGCATGATGCAATTCATGCTGCCATCTCACGTAAGAATGACATTCTCATTATTGATACCGCAGGTCGTCTGGCAAC
TCAGGATAATCTGATGGAAGAACTCAAGAAGGTGAAACGTGTCATTGGCAAAGCACTCCCTGGAGCGCCTCACCACACGC
TACTCGTTTTGGACGGCAATACCGGGCAGAACGGCTTAAGCCAGGTAAAGGCATTTCATGCCGCCTTGGGGCTGACTGGA
ATCATCGTGACCAAGCTAGATGGCACCGCTAAAGGTGGCGTGATCTGCGCCCTTGCCCACACCCTACAAGAAGGCCCAAA
ACCCGCTGTTCTAGCCCTAGGCAAAGGTGAGGGAATTGATGATTTAGCCCCCTTTACAGCAGGGCAATATTCTTCCGAAT
TATTCAATTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (4-68)

• SRP54-type protein, GTPase domain (SRP54) (92-295)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.218	98.986	0.517