Detailed information NTG0099171

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACKTXI_RS03065
• Genome accession: NZ_AP035884
• Coordinates: 671689..672711 (+)
• Length: 340 a.a.
• NCBI ID: WP_319598451.1
• Uniprot ID: -
• Organism: Streptomyces sp. CMC78
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 666689..677711

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKTXI_RS03040 (SCMC78_06260)	-	667075..668025 (-)	951	WP_408053300.1	NAD-dependent epimerase/dehydratase family protein	-
ACKTXI_RS03045 (SCMC78_06270)	-	668150..668581 (+)	432	WP_319598434.1	hypothetical protein	-
ACKTXI_RS03050 (SCMC78_06280)	-	668688..669518 (-)	831	WP_030623174.1	ABC transporter ATP-binding protein	-
ACKTXI_RS03055 (SCMC78_06290)	-	669515..670534 (-)	1020	WP_319598433.1	ABC transporter substrate-binding protein	-
ACKTXI_RS03060 (SCMC78_06300)	-	670571..671434 (-)	864	WP_086778682.1	ABC transporter permease	-
ACKTXI_RS03065 (SCMC78_06310)	cytR	671689..672711 (+)	1023	WP_319598451.1	LacI family DNA-binding transcriptional regulator	Regulator
ACKTXI_RS03070 (SCMC78_06320)	-	672745..673329 (-)	585	WP_030076479.1	GAF domain-containing protein	-
ACKTXI_RS03075 (SCMC78_06330)	-	673326..673949 (-)	624	WP_030623183.1	GTP-binding protein	-
ACKTXI_RS03080 (SCMC78_06340)	-	673927..674298 (-)	372	WP_030076475.1	DUF742 domain-containing protein	-
ACKTXI_RS03085 (SCMC78_06350)	-	674301..674735 (-)	435	WP_030582309.1	roadblock/LC7 domain-containing protein	-
ACKTXI_RS03090 (SCMC78_06360)	-	674741..676825 (-)	2085	WP_408053301.1	sensor histidine kinase	-

Sequence

Protein

• Length: 340 a.a.
• Molecular weight: 35495.71 Da
• Isoelectric Point: 9.6687

>NTDB_id=99171 ACKTXI_RS03065 WP_319598451.1 671689..672711(+) (cytR) [Streptomyces sp. CMC78]
MTLDAVAREAGVSLATASRALNGTTRVRDDLRGRVRAAADLLGYIPNAHAQALASAEGNRTVGLICHDVGDPYFAGIAGG
VMRAAAEQDLLVMLASTFREPAREIAYVSMLRAQRARAILLIGSGFQDRAWERAMDAELGPYVRAGGRVAVVSRHRSMRV
DTVQPENRAGAAALAASLVALGHREFAVLSGPPELTTVADRLTGFREGLAGAGITLERVVRGAFTREGGHTATRQLLAAG
GPRPTCLFAVTDVMAVGALAALREAGVRVPEDMSLAGFDDIPVVREVSPPLTTVALPLTEMGEQVIALALRTPSGAGRSR
VLRIEGNVVLRGSTGAPPGS

Nucleotide

• Length: 1023 bp

>NTDB_id=99171 ACKTXI_RS03065 WP_319598451.1 671689..672711(+) (cytR) [Streptomyces sp. CMC78]
GTGACGCTCGACGCGGTGGCGCGCGAGGCGGGCGTCTCGCTGGCCACCGCGTCCCGGGCGCTGAACGGCACCACCCGGGT
CCGCGACGATCTGCGCGGCCGGGTCCGCGCGGCGGCCGATCTGCTCGGCTACATCCCCAACGCCCACGCCCAGGCCCTGG
CGAGCGCGGAGGGGAACCGTACGGTCGGGCTGATCTGCCACGACGTCGGCGACCCCTACTTCGCGGGCATCGCCGGCGGG
GTGATGCGCGCGGCCGCCGAACAGGATCTGCTGGTGATGCTCGCCTCCACCTTCCGCGAACCCGCCCGCGAGATCGCGTA
CGTCTCGATGCTGCGGGCCCAGCGCGCGCGGGCCATCCTGCTGATCGGCTCCGGCTTCCAGGACCGGGCCTGGGAGCGGG
CGATGGACGCGGAGCTGGGGCCGTACGTCCGGGCCGGCGGGCGGGTCGCGGTGGTCAGCCGGCACCGGTCCATGCGGGTG
GACACCGTGCAGCCGGAGAACCGGGCCGGGGCGGCGGCGCTCGCGGCCTCGCTGGTGGCGCTGGGGCACCGGGAGTTCGC
GGTGCTGAGCGGTCCGCCCGAACTGACCACGGTGGCAGACCGGTTGACCGGATTCCGCGAGGGGCTCGCCGGGGCGGGCA
TCACCCTGGAGCGGGTGGTGCGGGGCGCGTTCACCCGGGAGGGCGGGCACACGGCGACACGGCAACTGCTGGCCGCCGGG
GGGCCGCGGCCGACCTGTCTGTTCGCGGTGACCGATGTGATGGCGGTCGGCGCGCTCGCCGCGCTGCGGGAGGCCGGCGT
ACGCGTGCCCGAGGACATGTCGCTCGCGGGCTTCGACGACATCCCCGTCGTACGGGAGGTGTCGCCGCCGCTGACCACGG
TGGCGCTGCCGCTCACCGAGATGGGCGAGCAGGTGATCGCCCTCGCGCTGCGGACACCGTCGGGAGCGGGGCGCTCCCGG
GTGCTGCGGATCGAGGGGAACGTGGTCCTGCGGGGCAGCACCGGTGCGCCGCCCGGGAGTTGA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (2-47)

• Periplasmic binding protein-like domain (Peripla_BP_3) (177-334)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	35.735	100	0.365