Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   AT694_RS09420 Genome accession   NZ_LN831036
Coordinates   1906697..1907437 (-) Length   246 a.a.
NCBI ID   WP_000216872.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NCTC13435     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1901697..1912437
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AT694_RS09395 (ERS445051_01781) hemH 1902573..1903496 (-) 924 WP_000162873.1 ferrochelatase -
  AT694_RS09400 (ERS445051_01782) hemE 1903554..1904591 (-) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  AT694_RS09405 - 1904581..1904691 (-) 111 WP_001790154.1 hypothetical protein -
  AT694_RS09410 (ERS445051_01783) traP 1904854..1905357 (+) 504 WP_000737978.1 signal transduction protein TRAP -
  AT694_RS09415 (ERS445051_01784) ecsB 1905481..1906704 (-) 1224 WP_000551840.1 ABC transporter permease EcsB -
  AT694_RS09420 (ERS445051_01785) pptA 1906697..1907437 (-) 741 WP_000216872.1 ABC transporter ATP-binding protein EcsA Regulator
  AT694_RS09425 (ERS445051_01786) - 1907571..1907993 (+) 423 WP_000004981.1 HIT family protein -
  AT694_RS09430 (ERS445051_01787) - 1908135..1908500 (+) 366 WP_000648118.1 YtxH domain-containing protein -
  AT694_RS09435 (ERS445051_01788) - 1909233..1909790 (+) 558 WP_000477957.1 DUF3267 domain-containing protein -
  AT694_RS09440 (ERS445051_01789) - 1909995..1910957 (+) 963 WP_000782121.1 foldase protein PrsA -
  AT694_RS09445 (ERS445051_01790) yhaM 1911078..1912019 (-) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27673.03 Da        Isoelectric Point: 4.7455

>NTDB_id=991701 AT694_RS09420 WP_000216872.1 1906697..1907437(-) (pptA) [Staphylococcus aureus strain NCTC13435]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEAVAFGDLEALRQQTGLHKQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=991701 AT694_RS09420 WP_000216872.1 1906697..1907437(-) (pptA) [Staphylococcus aureus strain NCTC13435]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATCGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGCCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAAACAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

97.154

0.553
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545