Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   AT694_RS00120 Genome accession   NZ_LN831036
Coordinates   29463..30263 (+) Length   266 a.a.
NCBI ID   WP_001813851.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NCTC13435     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 24463..35263
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AT694_RS00105 (ERS445051_00023) walK 25125..26951 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  AT694_RS00110 (ERS445051_00024) yycH 26944..28278 (+) 1335 WP_001060140.1 two-component system activity regulator YycH -
  AT694_RS00115 (ERS445051_00025) - 28279..29067 (+) 789 WP_001104173.1 two-component system regulatory protein YycI -
  AT694_RS00120 (ERS445051_00026) vicX 29463..30263 (+) 801 WP_001813851.1 MBL fold metallo-hydrolase Regulator
  AT694_RS00125 (ERS445051_00027) adsA 30472..32784 (+) 2313 WP_000645766.1 LPXTG-anchored adenosine synthase AdsA -
  AT694_RS00135 (ERS445051_00028) rlmH 33152..33631 (+) 480 WP_000704779.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  AT694_RS00140 (ERS445051_00029) - 33953..35209 (+) 1257 WP_000566670.1 MrcB family domain-containing protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30312.53 Da        Isoelectric Point: 6.4996

>NTDB_id=991634 AT694_RS00120 WP_001813851.1 29463..30263(+) (vicX) [Staphylococcus aureus strain NCTC13435]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQINRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=991634 AT694_RS00120 WP_001813851.1 29463..30263(+) (vicX) [Staphylococcus aureus strain NCTC13435]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTAATCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACTCATGAACATATTGATCATATTAAAGGGTTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAAGCTATTGAAAAGAAAGATAGTCGAATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTTGATGTTGAATCTTTTAACGTGTCACATGATGCGATAGATCCACAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGCCATGCGATGACGGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCACATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACCGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

48.638

96.617

0.47

Multiple sequence alignment