Detailed information NTG0991622

Bioinformatically predicted

Overview

• Name: radA/sms
• Type: Machinery gene
• Locus tag: AT683_RS08030
• Genome accession: NZ_LN831035
• Coordinates: 1623148..1624524 (-)
• Length: 458 a.a.
• NCBI ID: WP_048952018.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain NCTC8143
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1618148..1629524

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AT683_RS08015 (ERS450003_01611)	lolA	1619184..1619801 (-)	618	WP_042611209.1	outer membrane lipoprotein chaperone LolA	-
AT683_RS08020 (ERS450003_01612)	-	1619819..1622587 (-)	2769	WP_058222225.1	DNA translocase FtsK	-
AT683_RS08025 (ERS450003_01613)	lrp	1622589..1623068 (-)	480	WP_005664572.1	leucine-responsive transcriptional regulator Lrp	-
AT683_RS08030 (ERS450003_01614)	radA/sms	1623148..1624524 (-)	1377	WP_048952018.1	DNA repair protein RadA	Machinery gene
AT683_RS08035 (ERS450003_01615)	-	1624756..1625802 (-)	1047	WP_005656937.1	inorganic triphosphatase	-

Sequence

Protein

• Length: 458 a.a.
• Molecular weight: 49441.01 Da
• Isoelectric Point: 8.1109

>NTDB_id=991622 AT683_RS08030 WP_048952018.1 1623148..1624524(-) (radA/sms) [Haemophilus influenzae strain NCTC8143]
MAKAPKTAYVCNDCGAEFSRWQGQCSACKAWNTITEVRLISTAKSKNDRFSGYAGETQAKIQTLSEISLQETPRFSSGFN
ELDRVLGGGIVPGSAILIGGHPGAGKSTLLLQVMCGLAKNMTALYVTGEESLQQVAMRASRLGLPNDQLKMLSETSVEQI
CNLSDQLKPQIIVVDSIQVMHLADIQSSPGSVAQVRECASFLTRYAKTRQVAIIMVGHVTKDGTLAGPKVLEHAIDCSLL
LEGEADSRYRTLRSHKNRFGAVNELGVFGMTEQGLREVKNPSAIFLSRGDEITSGSSVMVLWEGTRPLLVEIQALVDHSM
LANPRRVAVGLEQNRLALLLAVLHRHGGLQMADQDVFVNVVGGVKVSETSADLALLLALISSFRNRPLPQDLVIFGEVGL
AGEIRPVPSGQERISEAAKHGFKRAIVPFGNKPKSAVENMQVFTVKKLTDALAVLDNL

Nucleotide

• Length: 1377 bp

>NTDB_id=991622 AT683_RS08030 WP_048952018.1 1623148..1624524(-) (radA/sms) [Haemophilus influenzae strain NCTC8143]
ATGGCTAAAGCCCCGAAAACAGCTTATGTATGTAACGATTGTGGTGCAGAGTTTTCTCGTTGGCAAGGGCAATGTTCGGC
TTGTAAAGCGTGGAATACAATCACGGAAGTGCGGTTAATTTCCACGGCAAAATCAAAAAATGATCGTTTTAGTGGCTATG
CGGGGGAAACTCAGGCAAAAATTCAAACCCTTTCTGAAATTAGTTTGCAAGAAACACCACGTTTTTCCAGTGGCTTTAAT
GAATTAGATCGGGTATTGGGCGGCGGGATCGTACCGGGCAGTGCGATTTTAATTGGTGGGCATCCTGGAGCAGGGAAAAG
TACCTTGTTATTACAAGTTATGTGTGGTTTGGCGAAAAATATGACCGCACTTTATGTGACGGGAGAGGAATCGTTACAAC
AGGTTGCGATGCGTGCTAGTCGATTGGGATTGCCAAACGATCAATTAAAAATGTTGTCAGAAACCTCTGTGGAACAGATT
TGTAATTTGTCGGATCAGTTAAAACCGCAAATTATAGTGGTAGACTCGATCCAAGTAATGCATCTGGCGGATATTCAATC
ATCGCCAGGCAGTGTGGCACAAGTGCGTGAATGTGCTTCTTTCCTCACTCGTTATGCGAAAACCCGACAAGTCGCCATTA
TTATGGTGGGGCATGTAACGAAAGACGGTACGCTTGCAGGGCCGAAAGTGTTAGAGCATGCTATTGATTGTTCATTACTA
TTAGAAGGCGAAGCCGATTCTCGTTATCGTACTTTGCGTAGCCATAAAAACCGTTTTGGTGCAGTCAATGAATTAGGTGT
ATTTGGAATGACAGAGCAGGGTTTGCGCGAAGTGAAAAATCCATCGGCGATTTTTTTAAGTCGCGGAGATGAAATTACGT
CAGGCAGTTCTGTTATGGTACTTTGGGAGGGTACTCGCCCTCTTTTAGTGGAAATTCAAGCCTTGGTGGATCATTCAATG
CTGGCAAATCCTCGCCGTGTTGCGGTGGGATTAGAGCAAAATCGCTTAGCGCTATTACTGGCGGTTTTACATAGACACGG
AGGTTTGCAAATGGCGGATCAAGATGTTTTTGTAAATGTGGTTGGTGGTGTAAAAGTCAGTGAAACCAGTGCGGATTTAG
CTTTGTTGCTTGCATTAATTTCAAGTTTCCGTAATCGCCCTTTGCCGCAAGATTTAGTGATTTTTGGCGAAGTTGGATTA
GCGGGAGAAATTCGTCCTGTGCCAAGTGGACAGGAACGTATTAGCGAGGCTGCAAAACACGGTTTTAAACGTGCTATTGT
TCCTTTTGGTAACAAGCCGAAAAGTGCGGTCGAAAATATGCAGGTTTTTACTGTGAAAAAACTCACGGATGCGCTCGCTG
TGTTAGATAATTTGTAA

Domains

Predicted by InterProScan.

• AAA domain (AAA_25) (80-223)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (9-36)

• Subunit ChlI of Mg-chelatase (ChlI) (346-431)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA/sms	Bacillus subtilis subsp. subtilis str. 168	46.623	100	0.467
radA	Streptococcus mitis NCTC 12261	43.267	98.908	0.428
radA	Streptococcus mitis SK321	43.267	98.908	0.428
radA	Streptococcus pneumoniae Rx1	44.755	93.668	0.419
radA	Streptococcus pneumoniae D39	44.755	93.668	0.419
radA	Streptococcus pneumoniae R6	44.755	93.668	0.419
radA	Streptococcus pneumoniae TIGR4	44.755	93.668	0.419