Detailed information NTG0991592

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AT683_RS02530
• Genome accession: NZ_LN831035
• Coordinates: 518408..519406 (-)
• Length: 332 a.a.
• NCBI ID: WP_005659739.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain NCTC8143
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 513408..524406

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AT683_RS02505 (ERS450003_00494)	tehA	514376..515320 (+)	945	WP_005659732.1	dicarboxylate transporter/tellurite-resistance protein TehA	-
AT683_RS02510 (ERS450003_00495)	tsaA	515373..516092 (-)	720	WP_011272092.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
AT683_RS02515 (ERS450003_00496)	menA	516154..517071 (+)	918	WP_032827535.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
AT683_RS02520 (ERS450003_00497)	rraA	517123..517611 (+)	489	WP_005649446.1	ribonuclease E activity regulator RraA	-
AT683_RS02525 (ERS450003_00498)	-	517751..518302 (-)	552	WP_005649445.1	TIGR00645 family protein	-
AT683_RS02530 (ERS450003_00499)	cytR	518408..519406 (-)	999	WP_005659739.1	substrate-binding domain-containing protein	Regulator
AT683_RS02535 (ERS450003_00500)	rbsK	519434..520354 (-)	921	WP_011272090.1	ribokinase	-
AT683_RS02540 (ERS450003_00501)	rbsB	520452..521330 (-)	879	WP_005639843.1	ribose ABC transporter substrate-binding protein RbsB	-
AT683_RS02545 (ERS450003_00502)	rbsC	521350..522318 (-)	969	WP_005664522.1	ribose ABC transporter permease	-
AT683_RS02550 (ERS450003_00503)	rbsA	522334..523815 (-)	1482	WP_011272089.1	ribose ABC transporter ATP-binding protein RbsA	-
AT683_RS02555 (ERS450003_00504)	rbsD	523829..524248 (-)	420	WP_005664526.1	D-ribose pyranase	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36706.44 Da
• Isoelectric Point: 7.6368

>NTDB_id=991592 AT683_RS02530 WP_005659739.1 518408..519406(-) (cytR) [Haemophilus influenzae strain NCTC8143]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQKNQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVETLLQRIKNPNENYLTLVLEP
TCVLRESIYSFK

Nucleotide

• Length: 999 bp

>NTDB_id=991592 AT683_RS02530 WP_005659739.1 518408..519406(-) (cytR) [Haemophilus influenzae strain NCTC8143]
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCTACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCTTCAGCTGTTGCACGAAGCC
TTAAGGTGCGCGAAACCAAAACTATCGGGCTACTTGTCACCGCAACAAATAATCCCTTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATATTGTCAGAAAAATCAATATAATCTTATTATTGCTACAACGGGTGGAGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCCATTTCGCTGCCACTGGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATTGATGCAGGACATCGTAAAATTGGCATTATTACGGGAAATCTCAAAAA
ATCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTGTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTCGGTGCATACCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGCTATGATGACATTGAATTGGCTCGTTATCTCTCGCCTCCTCTCTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTCGCTGTTGAAACACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCTCACTTTGGTGTTAGAACCG
ACTTGTGTGTTAAGAGAGTCTATTTACAGTTTCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	36.89	98.795	0.364
cytR	Vibrio cholerae C6706	36.585	98.795	0.361