Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | SP4011_RS11180 | Genome accession | NZ_AP026968 |
| Coordinates | 2281917..2284349 (-) | Length | 810 a.a. |
| NCBI ID | WP_338619345.1 | Uniprot ID | - |
| Organism | Streptococcus parapneumoniae strain SP4011 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2276917..2289349
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SP4011_RS11165 (SP4011_21590) | - | 2278700..2279227 (-) | 528 | WP_338619340.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
| SP4011_RS11170 (SP4011_21600) | - | 2279395..2280738 (-) | 1344 | WP_338619342.1 | HAMP domain-containing sensor histidine kinase | - |
| SP4011_RS11175 (SP4011_21610) | rr06 | 2280735..2281388 (-) | 654 | WP_338619344.1 | two-component system response regulator RR06 | - |
| SP4011_RS11180 (SP4011_21620) | clpC | 2281917..2284349 (-) | 2433 | WP_338619345.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| SP4011_RS11185 (SP4011_21630) | - | 2284351..2284809 (-) | 459 | WP_338619347.1 | CtsR family transcriptional regulator | - |
| SP4011_RS11190 (SP4011_21640) | - | 2284928..2285656 (-) | 729 | WP_338619348.1 | ABC transporter ATP-binding protein | - |
| SP4011_RS11195 (SP4011_21650) | - | 2285656..2286663 (-) | 1008 | WP_061864811.1 | ABC transporter substrate-binding protein | - |
| SP4011_RS11200 (SP4011_21660) | - | 2286701..2287459 (-) | 759 | WP_338619350.1 | ABC transporter permease | - |
| SP4011_RS11205 (SP4011_21670) | - | 2287422..2287712 (-) | 291 | WP_000647659.1 | thiamine-binding protein | - |
| SP4011_RS11210 (SP4011_21680) | cbpD | 2287966..2289084 (-) | 1119 | WP_338619353.1 | choline binding-anchored murein hydrolase CbpD | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90125.74 Da Isoelectric Point: 5.6725
>NTDB_id=99146 SP4011_RS11180 WP_338619345.1 2281917..2284349(-) (clpC) [Streptococcus parapneumoniae strain SP4011]
MNYSKALNECIESAYMVAGHFGAGYLESWHLLIAMSNHSYSVAGATLNDYPYEMDRLEEVALELTETDYSQDETFTELPF
SHRLQVLFDEAEYVASVVHAKVLGTEHVLYAILHDGNALATRILERAGFSYEDKKDQVKIAALRRNLEERAGWTREDLKA
LRQRHRTVADKQNSMANMMGMPQTPSGGLEDYTHDLTEQARSGKLEPVIGRDKEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPAEMAKMRVLELDLMNVVAGTRFRGDFEERMNNIIKDIEEDGQVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVTIEEPSVADSMTILQGLKATYEKHHRVQITDEAVET
AVKMAHRYLTSRHLPDSAIDLLDEAAATVQNKSKHVKADDSDLSPADKALMDGKWKQAAQLIAKEEEVPVYKDLVTESDI
LTTLSRLSGIPVQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAK
ALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDD
GVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSS
DHMQEVVKIMVKPLVASLAEKGIDLKLQTSALKLLANQGYDPEMGARPLRRTLQTEVEDKLAELLLKGELEAGSTLKIGV
KAGQLKFDIA
MNYSKALNECIESAYMVAGHFGAGYLESWHLLIAMSNHSYSVAGATLNDYPYEMDRLEEVALELTETDYSQDETFTELPF
SHRLQVLFDEAEYVASVVHAKVLGTEHVLYAILHDGNALATRILERAGFSYEDKKDQVKIAALRRNLEERAGWTREDLKA
LRQRHRTVADKQNSMANMMGMPQTPSGGLEDYTHDLTEQARSGKLEPVIGRDKEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPAEMAKMRVLELDLMNVVAGTRFRGDFEERMNNIIKDIEEDGQVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVTIEEPSVADSMTILQGLKATYEKHHRVQITDEAVET
AVKMAHRYLTSRHLPDSAIDLLDEAAATVQNKSKHVKADDSDLSPADKALMDGKWKQAAQLIAKEEEVPVYKDLVTESDI
LTTLSRLSGIPVQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAK
ALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDD
GVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSS
DHMQEVVKIMVKPLVASLAEKGIDLKLQTSALKLLANQGYDPEMGARPLRRTLQTEVEDKLAELLLKGELEAGSTLKIGV
KAGQLKFDIA
Nucleotide
Download Length: 2433 bp
>NTDB_id=99146 SP4011_RS11180 WP_338619345.1 2281917..2284349(-) (clpC) [Streptococcus parapneumoniae strain SP4011]
ATGAACTATTCAAAAGCATTGAATGAATGTATCGAAAGTGCCTACATGGTTGCTGGCCATTTTGGAGCTGGTTATCTAGA
GTCTTGGCACTTGTTGATTGCCATGTCCAATCACAGTTATAGTGTGGCAGGGGCAACTTTAAATGATTATCCATATGAGA
TGGACCGTTTAGAAGAGGTGGCTTTGGAACTGACTGAAACGGACTATAGCCAGGATGAAACCTTTACGGAATTGCCGTTT
TCTCATCGTTTGCAGGTCCTTTTTGACGAAGCAGAGTATGTGGCGTCAGTGGTCCATGCTAAGGTGCTAGGGACAGAGCA
TGTCCTCTATGCGATTTTGCATGATGGCAATGCCTTGGCGACCCGTATCTTGGAGAGGGCTGGTTTTTCTTATGAAGACA
AGAAAGATCAGGTCAAGATTGCTGCTCTTCGTCGAAATTTAGAAGAACGGGCAGGCTGGACTCGTGAAGACCTCAAGGCT
CTACGCCAACGCCATCGTACAGTAGCTGACAAGCAAAATTCTATGGCCAATATGATGGGCATGCCGCAGACTCCGAGCGG
TGGTCTTGAGGACTATACGCATGATTTGACAGAGCAAGCGCGTTCTGGCAAGTTGGAGCCAGTCATAGGTCGAGATAAGG
AAATCTCACGTATGATTCAAATCTTGAGCCGTAAGACCAAGAACAATCCTGTCTTGGTTGGGGATGCTGGTGTCGGGAAA
ACAGCTCTGGCGCTTGGTCTTGCCCAGCGTATTGCTAGTGGTGATGTACCTGCGGAAATGGCTAAGATGCGCGTGTTAGA
GCTTGATTTGATGAACGTTGTTGCAGGGACACGCTTCCGTGGTGACTTTGAAGAACGCATGAACAATATCATTAAGGATA
TTGAAGAAGATGGCCAAGTCATCCTCTTTATCGATGAACTTCACACTATCATGGGTTCTGGGAGTGGAATTGACTCAACT
CTGGATGCGGCCAATATCTTGAAGCCAGCCTTGGCGCGTGGAACTTTGAGAACGGTTGGTGCCACCACTCAGGAAGAATA
CCAAAAACATATCGAAAAAGATGCAGCCCTTTCTCGTCGTTTCGCCAAAGTGACGATTGAAGAGCCAAGTGTGGCAGACA
GCATGACCATTTTGCAAGGCTTGAAGGCGACTTATGAGAAACATCACCGTGTGCAAATCACAGATGAGGCGGTTGAAACA
GCCGTCAAGATGGCTCATCGTTACTTGACTAGCCGTCACTTGCCAGACTCTGCTATCGATCTTTTGGATGAAGCAGCGGC
AACAGTGCAAAATAAATCAAAGCATGTAAAAGCAGACGATTCTGACTTGAGTCCAGCTGACAAGGCCTTGATGGATGGCA
AGTGGAAACAGGCAGCTCAGCTAATCGCAAAAGAAGAGGAAGTGCCTGTCTATAAAGACTTGGTGACAGAGTCTGATATT
TTGACCACCTTGAGTCGCTTGTCAGGTATTCCAGTCCAAAAACTGACTCAAACTGATGCCAAGAAATACTTGAATTTGGA
AGCTGAATTGCACAAACGTGTTATCGGTCAAGATCAAGCAGTTTCAAGCATTAGCCGTGCCATTCGCCGCAATCAGTCAG
GGATTCGCAGTCACAAGCGTCCGATTGGCTCCTTTATGTTCCTAGGGCCTACGGGTGTCGGAAAAACTGAATTAGCCAAG
GCTCTGGCAGAAGTTCTTTTTGACGACGAATCAGCCCTTATCCGCTTTGATATGAGTGAGTATATGGAGAAATTTGCAGC
CAGCCGTCTCAACGGAGCTCCTCCAGGCTATGTGGGTTACGAAGAAGGTGGGGAGTTGACAGAGAAAGTTCGCAACAAAC
CCTATTCCGTTCTCCTCTTTGACGAGGTAGAGAAGGCCCATCCAGACATCTTTAATGTTCTCTTGCAGGTTTTGGATGAT
GGTGTCTTGACCGATAGCAAGGGCCGCAAGGTTGACTTTTCAAATACCATTATCATCATGACGTCAAATCTTGGTGCGAC
AGCTCTTCGGGATGACAAGACTGTCGGATTTGGGGCTAAGGACATTCGTTTTGACCAGGAAAATATGGAAAAACGCATGT
TTGAAGAGCTGAAAAAAGCTTATAGACCTGAGTTTATCAACCGTATTGATGAAAAGGTGGTCTTCCATAGCCTTTCTAGC
GACCATATGCAGGAAGTAGTGAAAATTATGGTCAAACCTTTAGTGGCAAGTTTGGCTGAAAAAGGTATTGACTTGAAATT
ACAAACTTCCGCACTGAAATTGTTGGCAAATCAAGGATATGACCCAGAGATGGGAGCTCGTCCACTTCGCAGAACCCTAC
AAACAGAAGTGGAGGACAAGTTGGCAGAGCTTCTTCTCAAGGGAGAATTAGAGGCAGGCAGCACACTTAAGATTGGTGTT
AAAGCAGGCCAGTTAAAATTTGATATTGCATAA
ATGAACTATTCAAAAGCATTGAATGAATGTATCGAAAGTGCCTACATGGTTGCTGGCCATTTTGGAGCTGGTTATCTAGA
GTCTTGGCACTTGTTGATTGCCATGTCCAATCACAGTTATAGTGTGGCAGGGGCAACTTTAAATGATTATCCATATGAGA
TGGACCGTTTAGAAGAGGTGGCTTTGGAACTGACTGAAACGGACTATAGCCAGGATGAAACCTTTACGGAATTGCCGTTT
TCTCATCGTTTGCAGGTCCTTTTTGACGAAGCAGAGTATGTGGCGTCAGTGGTCCATGCTAAGGTGCTAGGGACAGAGCA
TGTCCTCTATGCGATTTTGCATGATGGCAATGCCTTGGCGACCCGTATCTTGGAGAGGGCTGGTTTTTCTTATGAAGACA
AGAAAGATCAGGTCAAGATTGCTGCTCTTCGTCGAAATTTAGAAGAACGGGCAGGCTGGACTCGTGAAGACCTCAAGGCT
CTACGCCAACGCCATCGTACAGTAGCTGACAAGCAAAATTCTATGGCCAATATGATGGGCATGCCGCAGACTCCGAGCGG
TGGTCTTGAGGACTATACGCATGATTTGACAGAGCAAGCGCGTTCTGGCAAGTTGGAGCCAGTCATAGGTCGAGATAAGG
AAATCTCACGTATGATTCAAATCTTGAGCCGTAAGACCAAGAACAATCCTGTCTTGGTTGGGGATGCTGGTGTCGGGAAA
ACAGCTCTGGCGCTTGGTCTTGCCCAGCGTATTGCTAGTGGTGATGTACCTGCGGAAATGGCTAAGATGCGCGTGTTAGA
GCTTGATTTGATGAACGTTGTTGCAGGGACACGCTTCCGTGGTGACTTTGAAGAACGCATGAACAATATCATTAAGGATA
TTGAAGAAGATGGCCAAGTCATCCTCTTTATCGATGAACTTCACACTATCATGGGTTCTGGGAGTGGAATTGACTCAACT
CTGGATGCGGCCAATATCTTGAAGCCAGCCTTGGCGCGTGGAACTTTGAGAACGGTTGGTGCCACCACTCAGGAAGAATA
CCAAAAACATATCGAAAAAGATGCAGCCCTTTCTCGTCGTTTCGCCAAAGTGACGATTGAAGAGCCAAGTGTGGCAGACA
GCATGACCATTTTGCAAGGCTTGAAGGCGACTTATGAGAAACATCACCGTGTGCAAATCACAGATGAGGCGGTTGAAACA
GCCGTCAAGATGGCTCATCGTTACTTGACTAGCCGTCACTTGCCAGACTCTGCTATCGATCTTTTGGATGAAGCAGCGGC
AACAGTGCAAAATAAATCAAAGCATGTAAAAGCAGACGATTCTGACTTGAGTCCAGCTGACAAGGCCTTGATGGATGGCA
AGTGGAAACAGGCAGCTCAGCTAATCGCAAAAGAAGAGGAAGTGCCTGTCTATAAAGACTTGGTGACAGAGTCTGATATT
TTGACCACCTTGAGTCGCTTGTCAGGTATTCCAGTCCAAAAACTGACTCAAACTGATGCCAAGAAATACTTGAATTTGGA
AGCTGAATTGCACAAACGTGTTATCGGTCAAGATCAAGCAGTTTCAAGCATTAGCCGTGCCATTCGCCGCAATCAGTCAG
GGATTCGCAGTCACAAGCGTCCGATTGGCTCCTTTATGTTCCTAGGGCCTACGGGTGTCGGAAAAACTGAATTAGCCAAG
GCTCTGGCAGAAGTTCTTTTTGACGACGAATCAGCCCTTATCCGCTTTGATATGAGTGAGTATATGGAGAAATTTGCAGC
CAGCCGTCTCAACGGAGCTCCTCCAGGCTATGTGGGTTACGAAGAAGGTGGGGAGTTGACAGAGAAAGTTCGCAACAAAC
CCTATTCCGTTCTCCTCTTTGACGAGGTAGAGAAGGCCCATCCAGACATCTTTAATGTTCTCTTGCAGGTTTTGGATGAT
GGTGTCTTGACCGATAGCAAGGGCCGCAAGGTTGACTTTTCAAATACCATTATCATCATGACGTCAAATCTTGGTGCGAC
AGCTCTTCGGGATGACAAGACTGTCGGATTTGGGGCTAAGGACATTCGTTTTGACCAGGAAAATATGGAAAAACGCATGT
TTGAAGAGCTGAAAAAAGCTTATAGACCTGAGTTTATCAACCGTATTGATGAAAAGGTGGTCTTCCATAGCCTTTCTAGC
GACCATATGCAGGAAGTAGTGAAAATTATGGTCAAACCTTTAGTGGCAAGTTTGGCTGAAAAAGGTATTGACTTGAAATT
ACAAACTTCCGCACTGAAATTGTTGGCAAATCAAGGATATGACCCAGAGATGGGAGCTCGTCCACTTCGCAGAACCCTAC
AAACAGAAGTGGAGGACAAGTTGGCAGAGCTTCTTCTCAAGGGAGAATTAGAGGCAGGCAGCACACTTAAGATTGGTGTT
AAAGCAGGCCAGTTAAAATTTGATATTGCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae D39 |
99.012 |
100 |
0.99 |
| clpC | Streptococcus pneumoniae TIGR4 |
99.012 |
100 |
0.99 |
| clpC | Streptococcus pneumoniae Rx1 |
99.012 |
100 |
0.99 |
| clpC | Streptococcus mutans UA159 |
67.036 |
100 |
0.673 |
| clpC | Streptococcus thermophilus LMD-9 |
66.093 |
100 |
0.664 |
| clpC | Streptococcus thermophilus LMG 18311 |
65.971 |
100 |
0.663 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.038 |
100 |
0.504 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.365 |
99.877 |
0.453 |
| clpE | Streptococcus mutans UA159 |
48.986 |
79.136 |
0.388 |
| clpE | Streptococcus pneumoniae Rx1 |
47.152 |
78.025 |
0.368 |
| clpE | Streptococcus pneumoniae D39 |
47.152 |
78.025 |
0.368 |
| clpE | Streptococcus pneumoniae R6 |
47.152 |
78.025 |
0.368 |
| clpE | Streptococcus pneumoniae TIGR4 |
47.152 |
78.025 |
0.368 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
46.955 |
77.037 |
0.362 |