Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   VV34_RS07815 Genome accession   NZ_LN649259
Coordinates   1474534..1474998 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain BS49     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1469534..1479998
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VV34_RS07795 (BS49_15560) kinA 1470000..1471820 (+) 1821 WP_003245779.1 sporulation histidine kinase KinA -
  VV34_RS07800 (BS49_15570) dapX 1471831..1473012 (-) 1182 WP_003232415.1 aminotransferase A -
  VV34_RS22705 (BS49_15580) - 1473214..1473375 (-) 162 WP_003245246.1 hypothetical protein -
  VV34_RS07810 (BS49_15590) cheV 1473579..1474490 (+) 912 WP_009967126.1 chemotaxis protein CheV -
  VV34_RS07815 (BS49_15600) kre 1474534..1474998 (-) 465 WP_003232406.1 YkyB family protein Regulator
  VV34_RS07820 (BS49_15610) - 1475435..1475749 (+) 315 WP_000420682.1 YdcP family protein -
  VV34_RS07825 (BS49_15620) - 1475765..1476151 (+) 387 WP_000985015.1 YdcP family protein -
  VV34_RS07830 (BS49_15630) - 1476180..1477565 (+) 1386 WP_000813488.1 FtsK/SpoIIIE domain-containing protein -
  VV34_RS22710 - 1477568..1477720 (+) 153 WP_000879507.1 hypothetical protein -
  VV34_RS07835 (BS49_15640) mobT 1477743..1478948 (+) 1206 WP_000398284.1 MobT family relaxase -
  VV34_RS07840 (BS49_15650) - 1478991..1479212 (+) 222 WP_001009056.1 hypothetical protein -
  VV34_RS07845 (BS49_15660) - 1479329..1479826 (+) 498 WP_000342539.1 antirestriction protein ArdA -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=991073 VV34_RS07815 WP_003232406.1 1474534..1474998(-) (kre) [Bacillus subtilis strain BS49]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=991073 VV34_RS07815 WP_003232406.1 1474534..1474998(-) (kre) [Bacillus subtilis strain BS49]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTATCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterProScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1