Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | ACGHAS_RS06035 | Genome accession | NZ_AP035801 |
| Coordinates | 1238022..1238537 (+) | Length | 171 a.a. |
| NCBI ID | WP_001130208.1 | Uniprot ID | Q8FEP8 |
| Organism | Escherichia coli strain E. coli JCM:5491 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1233022..1243537
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACGHAS_RS05985 (ReJCM5491_11510) | csrA | 1233739..1233924 (+) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| ACGHAS_RS06020 (ReJCM5491_11520) | yqaB | 1235252..1235818 (+) | 567 | WP_000273309.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| ACGHAS_RS06025 (ReJCM5491_11530) | yqaA | 1235815..1236243 (+) | 429 | WP_001287462.1 | YqaA family protein | - |
| ACGHAS_RS06030 (ReJCM5491_11540) | gshA | 1236316..1237872 (+) | 1557 | WP_000611804.1 | glutamate--cysteine ligase | - |
| ACGHAS_RS06035 (ReJCM5491_11550) | luxS | 1238022..1238537 (+) | 516 | WP_001130208.1 | S-ribosylhomocysteine lyase | Regulator |
| ACGHAS_RS06040 (ReJCM5491_11560) | - | 1238586..1239698 (-) | 1113 | WP_000638135.1 | ATP-binding protein | - |
| ACGHAS_RS06045 | - | 1239695..1240392 (-) | 698 | Protein_1183 | RNA ligase family protein | - |
| ACGHAS_RS06050 (ReJCM5491_11590) | emrB | 1240650..1242188 (-) | 1539 | WP_001305258.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| ACGHAS_RS06055 (ReJCM5491_11600) | emrA | 1242205..1243377 (-) | 1173 | WP_001295175.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19443.21 Da Isoelectric Point: 5.0362
>NTDB_id=99107 ACGHAS_RS06035 WP_001130208.1 1238022..1238537(+) (luxS) [Escherichia coli strain E. coli JCM:5491]
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARNILERDVRINSNEELA
LPKEKLQELHI
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARNILERDVRINSNEELA
LPKEKLQELHI
Nucleotide
Download Length: 516 bp
>NTDB_id=99107 ACGHAS_RS06035 WP_001130208.1 1238022..1238537(+) (luxS) [Escherichia coli strain E. coli JCM:5491]
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACTTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGCGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTCGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAACATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATCTAG
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACTTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGCGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTCGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAACATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
73.684 |
100 |
0.737 |