Detailed information NTG0990809

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ECHMS174_RS17105
• Genome accession: NZ_LM993812
• Coordinates: 3464753..3465778 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain K-12 substr. HMS174
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3459753..3470778

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ECHMS174_RS17085 (ECHMS174_03382)	metJ	3460814..3461131 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ECHMS174_RS17090 (ECHMS174_03383)	yiiX	3461315..3461923 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ECHMS174_RS17095 (ECHMS174_03384)	rpmE	3461984..3462196 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ECHMS174_RS17100 (ECHMS174_03385)	priA	3462399..3464597 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
ECHMS174_RS17105 (ECHMS174_03386)	cytR	3464753..3465778 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ECHMS174_RS17110 (ECHMS174_03387)	ftsN	3465870..3466829 (+)	960	WP_000068828.1	cell division protein FtsN	-
ECHMS174_RS17115 (ECHMS174_03388)	hslV	3466922..3467452 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ECHMS174_RS17120 (ECHMS174_03389)	hslU	3467462..3468793 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ECHMS174_RS17125 (ECHMS174_03390)	menA	3468860..3469786 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ECHMS174_RS17130 (ECHMS174_03391)	rraA	3469879..3470364 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ECHMS174_RS17135 (ECHMS174_03392)	zapB	3470449..3470694 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=990809 ECHMS174_RS17105 WP_000644904.1 3464753..3465778(+) (cytR) [Escherichia coli strain K-12 substr. HMS174]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=990809 ECHMS174_RS17105 WP_000644904.1 3464753..3465778(+) (cytR) [Escherichia coli strain K-12 substr. HMS174]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628