Detailed information NTG0990607

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: O2W21_RS14200
• Genome accession: NZ_JAPVBX010000001
• Coordinates: 2936148..2937173 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain KE21
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2931148..2942173

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O2W21_RS14170 (O2W21_14140)	zapB	2931232..2931477 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
O2W21_RS14175 (O2W21_14145)	rraA	2931562..2932047 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
O2W21_RS14180 (O2W21_14150)	menA	2932140..2933066 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
O2W21_RS14185 (O2W21_14155)	hslU	2933133..2934464 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
O2W21_RS14190 (O2W21_14160)	hslV	2934474..2935004 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
O2W21_RS14195 (O2W21_14165)	ftsN	2935097..2936056 (-)	960	WP_000068834.1	cell division protein FtsN	-
O2W21_RS14200 (O2W21_14170)	cytR	2936148..2937173 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
O2W21_RS14205 (O2W21_14175)	priA	2937329..2939527 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
O2W21_RS14210 (O2W21_14180)	rpmE	2939730..2939942 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
O2W21_RS14215 (O2W21_14185)	yiiX	2940003..2940611 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
O2W21_RS14220 (O2W21_14190)	metJ	2940671..2940988 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=990607 O2W21_RS14200 WP_000644908.1 2936148..2937173(-) (cytR) [Escherichia coli strain KE21]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=990607 O2W21_RS14200 WP_000644908.1 2936148..2937173(-) (cytR) [Escherichia coli strain KE21]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625