Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   MWH27_RS18585 Genome accession   NZ_JALJVV010000001
Coordinates   3446097..3446810 (-) Length   237 a.a.
NCBI ID   WP_014481000.1    Uniprot ID   -
Organism   Bacillus subtilis strain A-5     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3441097..3451810
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MWH27_RS18565 (MWH27_18510) ghrB 3441242..3442219 (+) 978 WP_072592561.1 D-glycerate dehydrogenase -
  MWH27_RS18570 (MWH27_18515) psdB 3442256..3444196 (-) 1941 WP_014480997.1 lantibiotic ABC transporter permease PsdB -
  MWH27_RS18575 (MWH27_18520) psdA 3444171..3444950 (-) 780 WP_014480998.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  MWH27_RS18580 (MWH27_18525) psdS 3445033..3446103 (-) 1071 WP_014480999.1 two-component sensor histidine kinase PsdS -
  MWH27_RS18585 (MWH27_18530) braR 3446097..3446810 (-) 714 WP_014481000.1 two-component system response regulator PsdR Regulator
  MWH27_RS18590 (MWH27_18535) - 3446957..3447165 (+) 209 Protein_3592 hypothetical protein -
  MWH27_RS18595 (MWH27_18540) yvcN 3447201..3447965 (-) 765 WP_015251150.1 arylamine N-acetyltransferase -
  MWH27_RS18600 (MWH27_18545) crh 3447966..3448223 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  MWH27_RS18605 (MWH27_18550) whiA 3448247..3449197 (-) 951 WP_003228147.1 DNA-binding protein WhiA -
  MWH27_RS18610 (MWH27_18555) mgfK 3449220..3450173 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  MWH27_RS18615 (MWH27_18560) rapZ 3450175..3451062 (-) 888 WP_003243903.1 RNase adapter RapZ -
  MWH27_RS18620 (MWH27_18565) rppI 3451087..3451563 (-) 477 WP_014481002.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27541.46 Da        Isoelectric Point: 4.6774

>NTDB_id=990441 MWH27_RS18585 WP_014481000.1 3446097..3446810(-) (braR) [Bacillus subtilis strain A-5]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RIDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSSRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=990441 MWH27_RS18585 WP_014481000.1 3446097..3446810(-) (braR) [Bacillus subtilis strain A-5]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGATTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGATCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGTGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCTCCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTTTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCCGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.982

94.515

0.435