Detailed information NTG0990169

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: LLO82_RS23510
• Genome accession: NZ_HG994851
• Coordinates: 4876156..4877181 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli isolate 127
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4871156..4882181

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLO82_RS23490 (AI2938V1_4502)	metJ	4872341..4872658 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
LLO82_RS23495 (AI2938V1_4503)	yiiX	4872718..4873326 (+)	609	WP_000702297.1	YiiX family permuted papain-like enzyme	-
LLO82_RS23500 (AI2938V1_4504)	rpmE	4873387..4873599 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
LLO82_RS23505 (AI2938V1_4505)	priA	4873802..4876000 (+)	2199	WP_001298416.1	primosomal protein N'	Machinery gene
LLO82_RS23510 (AI2938V1_4506)	cytR	4876156..4877181 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
LLO82_RS23515 (AI2938V1_4507)	ftsN	4877273..4878232 (+)	960	WP_000068847.1	cell division protein FtsN	-
LLO82_RS23520 (AI2938V1_4508)	hslV	4878325..4878855 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
LLO82_RS23525 (AI2938V1_4509)	hslU	4878865..4880196 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
LLO82_RS23530 (AI2938V1_4510)	menA	4880263..4881189 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
LLO82_RS23535 (AI2938V1_4511)	rraA	4881282..4881767 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
LLO82_RS23540 (AI2938V1_4512)	zapB	4881852..4882097 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=990169 LLO82_RS23510 WP_000644904.1 4876156..4877181(+) (cytR) [Escherichia coli isolate 127]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=990169 LLO82_RS23510 WP_000644904.1 4876156..4877181(+) (cytR) [Escherichia coli isolate 127]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628