Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilZ   Type   Machinery gene
Locus tag   ACAM36_RS10095 Genome accession   NZ_AP031604
Coordinates   2170218..2170574 (+) Length   118 a.a.
NCBI ID   WP_003091119.1    Uniprot ID   A0A0H2ZD30
Organism   Pseudomonas aeruginosa isolate PaSz     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2165218..2175574
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACAM36_RS10070 (RVB5_19920) fabF 2165430..2166674 (+) 1245 WP_003104132.1 beta-ketoacyl-ACP synthase II -
  ACAM36_RS10075 (RVB5_19930) pabC 2166674..2167489 (+) 816 WP_059298485.1 aminodeoxychorismate lyase -
  ACAM36_RS10080 (RVB5_19940) mltG 2167495..2168544 (+) 1050 WP_003104128.1 endolytic transglycosylase MltG -
  ACAM36_RS10085 (RVB5_19950) tmk 2168573..2169205 (+) 633 WP_003122486.1 dTMP kinase -
  ACAM36_RS10090 (RVB5_19960) - 2169198..2170184 (+) 987 WP_059298482.1 DNA polymerase III subunit delta' -
  ACAM36_RS10095 (RVB5_19970) pilZ 2170218..2170574 (+) 357 WP_003091119.1 PilZ domain-containing protein Machinery gene
  ACAM36_RS10100 (RVB5_19980) - 2170589..2171365 (+) 777 WP_003091117.1 TatD family hydrolase -
  ACAM36_RS10105 (RVB5_19990) - 2171591..2172724 (-) 1134 WP_003118082.1 aminotransferase class V-fold PLP-dependent enzyme -
  ACAM36_RS10110 (RVB5_20000) - 2172810..2173448 (+) 639 WP_003091114.1 TetR/AcrR family transcriptional regulator -
  ACAM36_RS10115 (RVB5_20010) - 2173598..2174494 (+) 897 WP_034082730.1 radical SAM protein -
  ACAM36_RS10120 (RVB5_20020) - 2174559..2175191 (+) 633 WP_003091112.1 DUF4823 domain-containing protein -

Sequence


Protein


Download         Length: 118 a.a.        Molecular weight: 12903.98 Da        Isoelectric Point: 9.9969

>NTDB_id=99011 ACAM36_RS10095 WP_003091119.1 2170218..2170574(+) (pilZ) [Pseudomonas aeruginosa isolate PaSz]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM

Nucleotide


Download         Length: 357 bp        

>NTDB_id=99011 ACAM36_RS10095 WP_003091119.1 2170218..2170574(+) (pilZ) [Pseudomonas aeruginosa isolate PaSz]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTGTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTCGGCGACGAAGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA

Domains


Predicted by InterProScan.

(17-106)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZD30

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

49.074

91.525

0.449

  pilZ Legionella pneumophila strain ERS1305867

49.074

91.525

0.449


Multiple sequence alignment