Detailed information NTG0990080

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: LLO83_RS23720
• Genome accession: NZ_HG994850
• Coordinates: 4929009..4930034 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli isolate 127
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4924009..4935034

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLO83_RS23700 (AI2831V1_4547)	metJ	4925194..4925511 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
LLO83_RS23705 (AI2831V1_4548)	yiiX	4925571..4926179 (+)	609	WP_000702297.1	YiiX family permuted papain-like enzyme	-
LLO83_RS23710 (AI2831V1_4549)	rpmE	4926240..4926452 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
LLO83_RS23715 (AI2831V1_4550)	priA	4926655..4928853 (+)	2199	WP_001298416.1	primosomal protein N'	Machinery gene
LLO83_RS23720 (AI2831V1_4551)	cytR	4929009..4930034 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
LLO83_RS23725 (AI2831V1_4552)	ftsN	4930126..4931085 (+)	960	WP_000068847.1	cell division protein FtsN	-
LLO83_RS23730 (AI2831V1_4553)	hslV	4931178..4931708 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
LLO83_RS23735 (AI2831V1_4554)	hslU	4931718..4933049 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
LLO83_RS23740 (AI2831V1_4555)	menA	4933116..4934042 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
LLO83_RS23745 (AI2831V1_4556)	rraA	4934135..4934620 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
LLO83_RS23750 (AI2831V1_4557)	zapB	4934705..4934950 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=990080 LLO83_RS23720 WP_000644904.1 4929009..4930034(+) (cytR) [Escherichia coli isolate 127]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=990080 LLO83_RS23720 WP_000644904.1 4929009..4930034(+) (cytR) [Escherichia coli isolate 127]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628