Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | ACAM36_RS02205 | Genome accession | NZ_AP031604 |
| Coordinates | 484171..484536 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa isolate PaSz | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 479171..489536
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACAM36_RS02175 (RVB5_04350) | pyrR | 479793..480305 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| ACAM36_RS02180 (RVB5_04360) | ruvX | 480417..480851 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| ACAM36_RS02185 (RVB5_04370) | - | 480851..481420 (-) | 570 | WP_003100947.1 | YqgE/AlgH family protein | - |
| ACAM36_RS02190 (RVB5_04380) | - | 481469..482362 (-) | 894 | WP_003162015.1 | energy transducer TonB | - |
| ACAM36_RS02195 (RVB5_04390) | gshB | 482509..483462 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| ACAM36_RS02200 (RVB5_04400) | pilG | 483717..484124 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| ACAM36_RS02205 (RVB5_04410) | pilH | 484171..484536 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| ACAM36_RS02210 (RVB5_04420) | - | 484587..485123 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| ACAM36_RS02215 (RVB5_04430) | pilJ | 485208..487256 (+) | 2049 | WP_003100940.1 | chemotaxis chemoreceptor PilJ | - |
| ACAM36_RS02220 (RVB5_04440) | pilK | 487317..488192 (+) | 876 | WP_003100938.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=98987 ACAM36_RS02205 WP_003084587.1 484171..484536(+) (pilH) [Pseudomonas aeruginosa isolate PaSz]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=98987 ACAM36_RS02205 WP_003084587.1 484171..484536(+) (pilH) [Pseudomonas aeruginosa isolate PaSz]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |