Detailed information NTG0098980

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: ACAM36_RS00100
• Genome accession: NZ_AP031604
• Coordinates: 21238..22263 (+)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa isolate PaSz
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 16238..27263

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACAM36_RS00075 (RVB5_00150)	-	16426..16743 (-)	318	WP_003097288.1	tetratricopeptide repeat protein	-
ACAM36_RS00080 (RVB5_00160)	trkA	16892..18265 (-)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
ACAM36_RS00085 (RVB5_00170)	rsmB	18293..19597 (-)	1305	WP_003458403.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
ACAM36_RS00090 (RVB5_00180)	fmt	19594..20538 (-)	945	WP_010793609.1	methionyl-tRNA formyltransferase	-
ACAM36_RS00095 (RVB5_00190)	def	20593..21099 (-)	507	WP_003107059.1	peptide deformylase	-
ACAM36_RS00100 (RVB5_00200)	tsaP	21238..22263 (+)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
ACAM36_RS00105 (RVB5_00210)	dprA	22398..23486 (+)	1089	WP_016264002.1	DNA-processing protein DprA	Machinery gene
ACAM36_RS00110 (RVB5_00220)	-	23527..24084 (+)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
ACAM36_RS00115 (RVB5_00230)	-	24094..25071 (-)	978	WP_003111202.1	NADPH:quinone reductase	-
ACAM36_RS00120 (RVB5_00240)	hemF	25262..26179 (+)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
ACAM36_RS00125 (RVB5_00250)	aroE	26237..27061 (+)	825	WP_003111201.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=98980 ACAM36_RS00100 WP_003097294.1 21238..22263(+) (tsaP) [Pseudomonas aeruginosa isolate PaSz]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=98980 ACAM36_RS00100 WP_003097294.1 21238..22263(+) (tsaP) [Pseudomonas aeruginosa isolate PaSz]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCAAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACACTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTATGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393