Detailed information NTG0989773

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BN896_RS13145
• Genome accession: NZ_HG738867
• Coordinates: 2655642..2656667 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli str. K-12 substr. MC4100 strain K-12
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2650642..2661667

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BN896_RS13125 (BN896_3607)	metJ	2651703..2652020 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
BN896_RS13130 (BN896_3606)	yiiX	2652204..2652812 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
BN896_RS13135 (BN896_3605)	rpmE	2652873..2653085 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
BN896_RS13140 (BN896_3604)	priA	2653288..2655486 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
BN896_RS13145 (BN896_3603)	cytR	2655642..2656667 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
BN896_RS13150 (BN896_3602)	ftsN	2656759..2657718 (+)	960	WP_000068828.1	cell division protein FtsN	-
BN896_RS13155 (BN896_3601)	hslV	2657811..2658341 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
BN896_RS13160 (BN896_3600)	hslU	2658351..2659682 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
BN896_RS13165 (BN896_3599)	menA	2659749..2660675 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BN896_RS13170 (BN896_3598)	rraA	2660768..2661253 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
BN896_RS13175 (BN896_3597)	zapB	2661338..2661583 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=989773 BN896_RS13145 WP_000644904.1 2655642..2656667(+) (cytR) [Escherichia coli str. K-12 substr. MC4100 strain K-12]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=989773 BN896_RS13145 WP_000644904.1 2655642..2656667(+) (cytR) [Escherichia coli str. K-12 substr. MC4100 strain K-12]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628