Detailed information NTG0989636

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: HUS2011_RS24605
• Genome accession: NZ_HF572917
• Coordinates: 4701378..4702403 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644897.1
• Uniprot ID: B7LA31
• Organism: Escherichia coli strain HUSEC2011
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4696378..4707403

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HUS2011_RS24575 (HUS2011_4694)	zapB	4696462..4696707 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
HUS2011_RS24580 (HUS2011_4695)	rraA	4696792..4697277 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
HUS2011_RS24585 (HUS2011_4696)	menA	4697370..4698296 (-)	927	WP_001307494.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
HUS2011_RS24590 (HUS2011_4697)	hslU	4698363..4699694 (-)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
HUS2011_RS24595 (HUS2011_4698)	hslV	4699704..4700234 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
HUS2011_RS24600 (HUS2011_4699)	ftsN	4700327..4701286 (-)	960	WP_000068834.1	cell division protein FtsN	-
HUS2011_RS24605 (HUS2011_4700)	cytR	4701378..4702403 (-)	1026	WP_000644897.1	DNA-binding transcriptional regulator CytR	Regulator
HUS2011_RS24610 (HUS2011_4702)	priA	4702559..4704757 (-)	2199	WP_001350069.1	primosomal protein N'	Machinery gene
HUS2011_RS24615 (HUS2011_4703)	rpmE	4704960..4705172 (+)	213	WP_000710769.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37800.74 Da
• Isoelectric Point: 6.3001

>NTDB_id=989636 HUS2011_RS24605 WP_000644897.1 4701378..4702403(-) (cytR) [Escherichia coli strain HUSEC2011]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALHRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=989636 HUS2011_RS24605 WP_000644897.1 4701378..4702403(-) (cytR) [Escherichia coli strain HUSEC2011]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCATCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: B7LA31

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625