Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   HMPREF9425_RS06600 Genome accession   NZ_GL831112
Coordinates   1346411..1348147 (-) Length   578 a.a.
NCBI ID   WP_003097685.1    Uniprot ID   A0ABN0CFP3
Organism   Streptococcus vestibularis ATCC 49124     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1341411..1353147
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HMPREF9425_RS06580 (HMPREF9425_1377) - 1341441..1342424 (-) 984 WP_003094431.1 rhodanese-related sulfurtransferase -
  HMPREF9425_RS06585 (HMPREF9425_1378) - 1342615..1343316 (-) 702 WP_003093842.1 glucosamine-6-phosphate deaminase -
  HMPREF9425_RS06590 (HMPREF9425_1379) queA 1343468..1344511 (+) 1044 WP_003097680.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  HMPREF9425_RS06595 (HMPREF9425_1380) rcrQ 1344611..1346398 (-) 1788 WP_003097683.1 ABC transporter ATP-binding protein Regulator
  HMPREF9425_RS06600 (HMPREF9425_1381) rcrP 1346411..1348147 (-) 1737 WP_003097685.1 ABC transporter ATP-binding protein Regulator

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 64832.76 Da        Isoelectric Point: 5.7828

>NTDB_id=989534 HMPREF9425_RS06600 WP_003097685.1 1346411..1348147(-) (rcrP) [Streptococcus vestibularis ATCC 49124]
MAYIWSYLKRYPKWLAMNFTAAILFVIANLGLPTVLARMIDEGINRGDADKLYTYAWVMFGVVLTGIVGRVLLAYAVGKL
TTTMVQVMRNDIYAKLQEYSHHEYEQIGVSSLVTRITSDAFVLMQFADQVLKLGVITPLMMVSSVFLILTTSPSLAWIVA
ISLPFLAVVVWYVAVKTRPLSEKQQTTLDKINQYARENLTGLRVIRAFAREDFQEKKFASENAVYADNSNKLFKLTGLTE
PLFVQIIIAMIVAIVWFALERLGSGTLAIGDLVAFIEYSFHALLSFLFLANLFTMYPRTAVSSERLQEIMDMPISINPNE
DGVTETETKGYLEFDNVTFAYPGETESPVLHNISFKAKPGETIAFIGSTGSGKSSLVQLIPRFYDVTLGRILVDGVDVRD
YNLKALRRKIGFIPQKALLFTGTIGENIRYGKENASHEELNQATDVAQAKEFIESKEERYDSHLAEGGSNLSGGQKQRLS
IARAVVKRPDLYIFDDSFSALDYKTDATLRRRLKEVTQDATVLIVAQRVGTIMDADQIIVLDKGEIVGRGRHEELMESND
IYREIANSQLNQKSLTED

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=989534 HMPREF9425_RS06600 WP_003097685.1 1346411..1348147(-) (rcrP) [Streptococcus vestibularis ATCC 49124]
ATGGCTTATATTTGGTCTTATCTCAAGCGTTATCCTAAGTGGCTAGCGATGAATTTTACGGCGGCCATTTTATTTGTTAT
TGCCAATTTGGGGCTGCCGACGGTTCTTGCCAGAATGATTGATGAGGGAATTAACCGTGGGGATGCAGACAAGCTTTATA
CCTATGCTTGGGTCATGTTTGGTGTGGTCTTAACTGGTATTGTTGGTCGTGTGCTTCTGGCCTATGCGGTTGGTAAGTTG
ACCACTACTATGGTGCAAGTCATGCGTAATGACATTTATGCTAAGCTTCAGGAGTATTCACACCATGAGTACGAACAAAT
TGGGGTATCTTCTTTGGTGACTCGTATCACGTCGGATGCTTTTGTTCTCATGCAGTTTGCAGATCAAGTTCTCAAGCTGG
GTGTTATCACTCCTTTGATGATGGTTTCCAGTGTCTTTTTGATTTTGACGACAAGTCCATCTTTGGCTTGGATTGTGGCA
ATTTCCTTGCCTTTCCTAGCCGTAGTTGTCTGGTATGTGGCGGTAAAAACGCGTCCGCTTTCTGAAAAGCAACAGACAAC
GCTCGACAAGATTAACCAGTATGCTCGTGAAAATCTGACTGGACTTCGTGTCATCCGTGCTTTCGCTAGAGAAGATTTTC
AAGAGAAGAAGTTCGCTTCTGAAAATGCTGTCTATGCGGATAATTCAAACAAACTTTTTAAATTGACTGGTTTGACTGAG
CCACTTTTTGTGCAAATCATCATAGCCATGATTGTGGCAATTGTTTGGTTTGCTCTTGAGCGGTTAGGTTCTGGGACTTT
GGCAATCGGTGACTTGGTTGCCTTTATTGAGTACAGCTTCCATGCACTATTGTCTTTCCTTTTCCTAGCCAATCTCTTTA
CCATGTATCCTCGTACAGCGGTATCTAGTGAACGTCTGCAGGAAATTATGGACATGCCGATTTCTATCAATCCAAATGAA
GATGGCGTGACAGAAACCGAGACTAAGGGATATTTGGAGTTTGACAATGTGACCTTTGCCTATCCTGGTGAAACTGAAAG
TCCTGTCCTACACAACATTTCTTTCAAGGCAAAACCTGGTGAAACCATTGCCTTTATTGGGTCTACGGGTTCAGGAAAAT
CATCACTTGTACAGTTGATTCCACGCTTTTATGATGTAACACTTGGACGCATTCTTGTGGATGGTGTGGATGTCCGTGAC
TACAATCTTAAGGCGCTTCGTCGTAAGATTGGCTTTATTCCACAAAAAGCTCTGCTCTTTACTGGAACTATCGGTGAAAA
TATTCGTTATGGTAAGGAAAATGCCAGTCATGAAGAATTGAATCAAGCTACTGATGTGGCTCAAGCCAAGGAATTTATCG
AAAGTAAGGAAGAACGCTATGATTCTCACTTGGCTGAAGGTGGTAGCAACCTTTCTGGGGGACAGAAGCAGCGTTTGTCA
ATTGCACGTGCGGTGGTTAAACGTCCTGATCTCTACATCTTTGATGATTCCTTCTCTGCCTTGGACTACAAGACTGATGC
GACCTTGCGTCGTCGTCTAAAAGAAGTGACCCAGGATGCGACGGTCTTGATCGTGGCTCAACGTGTGGGAACTATTATGG
ATGCTGATCAGATTATCGTTCTTGATAAGGGTGAAATTGTTGGTCGTGGTCGTCACGAAGAGCTTATGGAAAGTAATGAC
ATTTACCGTGAGATTGCTAATTCACAATTGAATCAAAAGAGTCTTACGGAAGACTAG

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(350-497)

ABC transporter transmembrane region (ABC_membrane)

(17-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.662

92.042

0.365