Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   HMPREF9425_RS06595 Genome accession   NZ_GL831112
Coordinates   1344611..1346398 (-) Length   595 a.a.
NCBI ID   WP_003097683.1    Uniprot ID   A0ABN0CFZ0
Organism   Streptococcus vestibularis ATCC 49124     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1339611..1351398
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HMPREF9425_RS06570 (HMPREF9425_1375) - 1339840..1340559 (-) 720 WP_003097676.1 16S rRNA pseudouridine(516) synthase -
  HMPREF9425_RS06575 (HMPREF9425_1376) - 1340640..1341323 (-) 684 WP_003093917.1 VIT1/CCC1 transporter family protein -
  HMPREF9425_RS06580 (HMPREF9425_1377) - 1341441..1342424 (-) 984 WP_003094431.1 rhodanese-related sulfurtransferase -
  HMPREF9425_RS06585 (HMPREF9425_1378) - 1342615..1343316 (-) 702 WP_003093842.1 glucosamine-6-phosphate deaminase -
  HMPREF9425_RS06590 (HMPREF9425_1379) queA 1343468..1344511 (+) 1044 WP_003097680.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  HMPREF9425_RS06595 (HMPREF9425_1380) rcrQ 1344611..1346398 (-) 1788 WP_003097683.1 ABC transporter ATP-binding protein Regulator
  HMPREF9425_RS06600 (HMPREF9425_1381) rcrP 1346411..1348147 (-) 1737 WP_003097685.1 ABC transporter ATP-binding protein Regulator

Sequence

Protein


Download         Length: 595 a.a.        Molecular weight: 66615.57 Da        Isoelectric Point: 4.9819

>NTDB_id=989533 HMPREF9425_RS06595 WP_003097683.1 1344611..1346398(-) (rcrQ) [Streptococcus vestibularis ATCC 49124]
MKNNKKKTTHSSSFGRLWSYLQVYRFPLYLAIFLKIISVTMSVIEPVVIGLAITELTKNTLDIIKGVEGAHINVSYVGLV
LVFYLLRGLIYELASYYSNYFMTNAVQATVQDMRNEMTEKINRTSVSYFDKQQFGDLLGRFTSDVETVSNALQQSFLQVV
NAVFTLALVIGTVLYLNLQLGAVVVITIPITYFGARFIMSKSQPYFKQQADALGTLNGFVQENLTGFNVLKLFGREDRSL
DDFKEITEDLQKVGFKANFISGLMMPVLNGLSDLTYLIVAVLGGLQVLAGHLTIGNMQAFVQYVWQINQPIQNLTQLAGQ
LQSAKSSLDRIFQLMDEPDEVNDATEVLEGELTGQVSFNHVEFQYVADKPLIRDFNLEVNPGEMVAIVGPTGAGKSTIIN
LLMRFYDVTAGSISVDGHDIRNLSRQDYRKQFGMVLQDAWLFEGTIKENLRFGNLEATDEEIVEAAKAANVDHFIRTLPG
GYNMEMNQESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKTLMQGRTSFVIAHRLSTIQEADKI
LVLKDGQIIEQGNHESLLADKGFYYDLYNSQFSEK

Nucleotide


Download         Length: 1788 bp        

>NTDB_id=989533 HMPREF9425_RS06595 WP_003097683.1 1344611..1346398(-) (rcrQ) [Streptococcus vestibularis ATCC 49124]
ATGAAGAATAATAAAAAGAAAACAACTCATTCCTCAAGTTTTGGCCGCCTTTGGTCATACTTGCAGGTTTACCGTTTCCC
ACTTTACCTAGCTATTTTCCTGAAAATTATTAGTGTCACCATGAGTGTCATTGAGCCGGTGGTCATTGGTTTAGCCATTA
CGGAACTGACTAAAAATACACTGGACATCATTAAGGGGGTAGAAGGGGCTCATATCAACGTTTCCTACGTTGGTTTAGTT
TTGGTCTTTTACCTCTTGCGTGGTCTCATCTATGAGTTGGCTTCTTACTATTCCAACTATTTTATGACCAATGCTGTGCA
AGCAACGGTTCAGGATATGCGAAATGAGATGACTGAGAAAATCAATCGTACTTCAGTGTCATACTTTGATAAGCAACAAT
TTGGAGACCTTTTGGGTCGCTTTACTAGTGACGTCGAGACAGTTTCGAATGCCTTGCAGCAGTCATTCTTGCAGGTTGTC
AATGCCGTCTTTACTCTAGCCTTGGTTATTGGAACAGTGCTGTACCTTAATCTTCAGTTGGGAGCTGTGGTTGTTATCAC
TATTCCGATTACTTACTTTGGTGCTCGTTTCATTATGAGTAAGTCTCAACCTTACTTTAAGCAGCAGGCTGATGCCCTAG
GTACTCTTAACGGTTTTGTTCAGGAAAATCTGACTGGTTTCAATGTGCTTAAACTTTTTGGGCGTGAGGATAGGTCTTTA
GACGACTTTAAAGAAATTACGGAAGACCTTCAAAAGGTAGGTTTTAAGGCCAATTTCATTTCAGGACTCATGATGCCTGT
CCTTAATGGTTTATCTGACTTGACCTATCTAATTGTCGCCGTCCTAGGTGGTTTGCAAGTCTTAGCTGGTCACTTGACGA
TTGGTAATATGCAGGCTTTTGTTCAGTACGTTTGGCAGATTAATCAACCTATTCAGAACTTGACTCAGTTGGCTGGACAA
TTGCAGAGTGCTAAATCTTCCTTGGACCGTATTTTCCAACTGATGGATGAACCAGACGAGGTTAATGATGCTACTGAGGT
GCTTGAAGGAGAATTAACTGGCCAAGTTAGCTTTAATCATGTGGAATTCCAGTATGTGGCTGATAAACCTTTGATTCGTG
ACTTTAATCTTGAAGTCAATCCTGGTGAAATGGTGGCCATTGTCGGTCCTACCGGTGCTGGAAAATCAACCATTATTAAT
CTTCTCATGCGTTTCTATGATGTTACTGCAGGTTCTATCTCGGTTGATGGTCATGATATACGCAACTTGTCGCGTCAAGA
TTATCGTAAACAGTTTGGTATGGTGCTTCAGGATGCTTGGCTTTTTGAAGGAACTATCAAGGAAAATCTTCGTTTTGGTA
ATCTTGAAGCAACTGATGAAGAAATTGTTGAAGCCGCTAAGGCTGCCAATGTGGATCACTTTATCCGTACGCTGCCTGGT
GGTTACAATATGGAAATGAACCAGGAATCAAGTAACATTTCACTGGGACAAAAGCAACTTTTGACCATTGCTCGTGCGCT
TCTGGCTGACCCTAAAATCTTGATTTTGGACGAGGCAACCTCATCAGTTGATACTCGTCTGGAACTCTTGATTCAAAAAG
CCATGAAGACCCTCATGCAAGGCCGAACAAGTTTTGTCATTGCTCACCGACTATCAACGATTCAAGAGGCAGACAAGATT
TTGGTCCTTAAAGATGGACAAATCATTGAACAAGGGAACCATGAATCCCTCCTTGCAGATAAAGGTTTTTATTACGATTT
GTATAATAGTCAATTTTCGGAGAAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(373-521)

ABC transporter transmembrane region (ABC_membrane)

(29-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

42.211

100

0.424