Detailed information NTG0989503

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: HMPREF9425_RS02840
• Genome accession: NZ_GL831112
• Coordinates: 535509..537905 (+)
• Length: 798 a.a.
• NCBI ID: WP_003096610.1
• Uniprot ID: A0ABN0CHS5
• Organism: Streptococcus vestibularis ATCC 49124
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 530509..542905

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HMPREF9425_RS02810 (HMPREF9425_0585)	-	530702..531079 (-)	378	WP_003096605.1	GntR family transcriptional regulator	-
HMPREF9425_RS02815 (HMPREF9425_0586)	-	531261..532055 (+)	795	WP_003096606.1	Cof-type HAD-IIB family hydrolase	-
HMPREF9425_RS02820 (HMPREF9425_0587)	-	532048..532866 (+)	819	WP_003096607.1	Cof-type HAD-IIB family hydrolase	-
HMPREF9425_RS02825 (HMPREF9425_0588)	pilA	532877..534181 (+)	1305	WP_003096608.1	signal recognition particle-docking protein FtsY	Machinery gene
HMPREF9425_RS02830 (HMPREF9425_0589)	gmk	534402..535031 (+)	630	WP_003094729.1	guanylate kinase	-
HMPREF9425_RS02835 (HMPREF9425_0590)	rpoZ	535053..535367 (+)	315	WP_003093276.1	DNA-directed RNA polymerase subunit omega	-
HMPREF9425_RS02840 (HMPREF9425_0591)	priA	535509..537905 (+)	2397	WP_003096610.1	primosomal protein N'	Machinery gene
HMPREF9425_RS02845 (HMPREF9425_0592)	fmt	537923..538858 (+)	936	WP_003096612.1	methionyl-tRNA formyltransferase	-
HMPREF9425_RS02850 (HMPREF9425_0593)	rsmB	538848..540170 (+)	1323	WP_037621653.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
HMPREF9425_RS02855 (HMPREF9425_0594)	-	540214..540951 (+)	738	WP_003094327.1	Stp1/IreP family PP2C-type Ser/Thr phosphatase	-
HMPREF9425_RS02860 (HMPREF9425_0595)	stkP/pknB	540951..542819 (+)	1869	WP_003093571.1	Stk1 family PASTA domain-containing Ser/Thr kinase	Regulator

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 90857.11 Da
• Isoelectric Point: 6.8145

>NTDB_id=989503 HMPREF9425_RS02840 WP_003096610.1 535509..537905(+) (priA) [Streptococcus vestibularis ATCC 49124]
MVLVAQIIVDVPLMQTDRPYSYLVPESMQGQIAIGMRIHVPFGKGNRLLQGFVIGFGEQENVRKLPDLKSIAELLDYEPV
LNQDQLDLADQMRHTVFSYKISILKSMLPGLLNSQYDKVIMATDKLSEEERDIFLQGRDHILFSQLSKEQGQAIPRLVES
GRVTVDYIAKDKQNIKTEKHYSVQRGILETLDISQRAKKRMELRDFLLEKNESGKLVDLHKLFSRDVVKFFIGTGALSIT
EVEVNRADSYFEKVEKTDFLELNTQQAYAVEVMTGQIGHGGKPFLLEGVTGSGKTEVYLHLIERTLAMGKTAIVLVPEIS
LTPQMTNRFISRFGDLVAIMHSGLSDGEKFDEWRKVRSGQAKVVVGARSAIFAPLENIGAIIIDEEHEATYKQESNPRYH
ARDVALLRAKSHGAVLVLGSATPSIESRARAQKGVYHFLELTERANPKAKIPQVEVVDFKDFVGRQEASDFTPPLLEKIR
ERLARKEQVVLMLNRRGYSSFVMCRDCGYVDDCPNCDISLTLHMDTKTMNCHYCDFQKAIPHVCPNCQSRQIRYYGTGTQ
KAYDQLTELLPEARVIRMDVDTTRKKGAHEKLLETFGSGQADILLGTQMIAKGLDFPNVTLVGVLNADTSLNLPDFRSAE
RTFQLLTQVAGRAGRADKEGEVIIQTYNPSHYAIRFAQQQDYEGFYAYEMAIRRQLAYPPYFYTVGITLSHKDEEFVIRK
SYDVMAYLREHLSDKVTFLGPTPKPIARTHNLYHYQIIIKYRFEDSLEETLNRILDMTQEPENKDLRLIIDHEPQNFT

Nucleotide

• Length: 2397 bp

>NTDB_id=989503 HMPREF9425_RS02840 WP_003096610.1 535509..537905(+) (priA) [Streptococcus vestibularis ATCC 49124]
ATGGTGTTAGTTGCACAAATAATTGTAGATGTTCCTCTGATGCAGACGGACAGGCCTTATAGTTACCTTGTACCCGAATC
CATGCAGGGGCAAATTGCCATCGGCATGAGGATTCATGTACCTTTTGGTAAAGGAAATCGTCTCTTGCAAGGGTTTGTTA
TTGGCTTTGGAGAGCAAGAAAATGTAAGAAAGCTGCCAGACTTGAAGTCAATTGCGGAACTTTTGGATTATGAACCAGTC
CTTAATCAGGATCAGCTGGATTTGGCTGACCAAATGCGACACACGGTTTTTTCCTATAAGATTTCCATCTTGAAGTCTAT
GCTTCCGGGTCTCCTTAATTCACAGTATGACAAAGTTATCATGGCAACTGATAAACTGAGCGAAGAGGAGAGGGACATTT
TTCTTCAGGGGCGAGATCATATTCTCTTCTCCCAATTGTCGAAGGAACAAGGTCAAGCTATTCCGCGTCTGGTGGAATCT
GGTCGCGTAACGGTTGATTACATTGCTAAGGATAAACAAAATATAAAAACGGAGAAGCATTATAGTGTTCAAAGGGGCAT
TTTAGAGACTTTGGATATTTCGCAACGAGCCAAGAAACGGATGGAGCTGCGCGACTTCTTGTTAGAAAAGAATGAGTCTG
GAAAGTTGGTAGACCTGCACAAACTTTTTTCTCGAGATGTGGTGAAGTTTTTCATTGGTACTGGAGCTCTATCTATCACT
GAAGTTGAGGTCAATCGTGCTGATAGCTACTTTGAAAAGGTAGAGAAGACGGATTTTCTAGAGCTTAATACTCAGCAGGC
ATATGCTGTTGAAGTAATGACAGGTCAGATTGGTCATGGTGGGAAGCCGTTCTTGTTGGAAGGAGTGACGGGGTCAGGTA
AGACTGAGGTTTACCTACATCTCATTGAGAGAACCTTGGCTATGGGGAAAACGGCTATTGTCTTGGTTCCAGAAATTTCT
CTGACGCCACAAATGACCAATCGTTTCATCTCCCGTTTTGGTGACTTAGTAGCAATCATGCATTCAGGTTTGTCAGACGG
TGAGAAATTTGACGAGTGGCGTAAGGTTAGGTCTGGTCAGGCCAAGGTTGTCGTAGGAGCGCGTTCGGCTATCTTTGCTC
CTTTGGAAAATATTGGGGCTATCATTATCGATGAGGAGCATGAGGCTACTTATAAACAAGAGTCCAATCCTCGTTACCAT
GCTAGAGATGTGGCCTTGCTTAGGGCTAAGAGTCATGGAGCTGTGCTTGTACTTGGGTCAGCTACGCCTTCTATTGAGTC
GCGAGCGAGGGCTCAGAAAGGGGTCTACCATTTTCTTGAGTTGACGGAGAGGGCCAATCCTAAGGCTAAAATTCCGCAGG
TGGAAGTGGTGGACTTTAAGGACTTTGTAGGTCGACAAGAGGCGAGTGATTTTACGCCCCCTCTCTTAGAGAAAATCCGA
GAACGCTTGGCACGTAAGGAACAAGTCGTGCTAATGTTGAACCGTCGTGGCTATTCCTCTTTTGTCATGTGTCGTGACTG
TGGCTATGTGGATGATTGTCCGAACTGTGATATTTCACTGACTTTGCATATGGATACTAAGACCATGAATTGTCACTATT
GTGATTTTCAAAAAGCTATTCCTCATGTTTGTCCTAACTGTCAGAGTCGCCAGATTCGCTATTATGGGACTGGAACACAA
AAGGCTTATGATCAATTGACGGAACTTTTGCCAGAAGCCAGAGTGATTCGTATGGATGTTGATACTACACGTAAAAAAGG
GGCTCACGAGAAGCTCCTAGAGACTTTTGGAAGTGGCCAGGCTGATATTCTGCTAGGAACCCAAATGATTGCCAAGGGCT
TGGATTTTCCCAATGTTACCTTGGTAGGGGTCTTAAATGCGGATACGTCGCTAAATTTGCCAGATTTTCGTTCGGCTGAG
CGTACCTTCCAGCTTTTGACACAAGTGGCTGGTCGTGCTGGTCGTGCTGACAAGGAAGGGGAAGTTATTATTCAAACCTA
TAATCCTAGTCATTATGCCATTCGTTTTGCACAGCAACAGGATTATGAGGGATTCTATGCCTATGAGATGGCGATTCGAC
GTCAGTTGGCCTACCCGCCATATTTTTATACGGTAGGGATCACTCTTTCCCACAAGGATGAAGAGTTTGTAATCCGTAAG
AGCTATGATGTCATGGCTTATTTAAGAGAACACTTGTCGGACAAGGTGACTTTCTTGGGACCAACACCAAAACCTATTGC
CCGAACACATAACCTTTATCATTATCAGATTATTATCAAATATCGTTTTGAGGATAGCTTGGAAGAGACGCTTAATAGGA
TCCTTGATATGACTCAGGAACCTGAAAATAAGGATCTGCGTTTGATTATCGACCATGAGCCTCAGAATTTTACCTAA

Domains

Predicted by InterProScan.

• 3DNA-binding domain (3BD) (PriA_3primeBD) (6-109)

• Helicase conserved C-terminal domain (Helicase_C) (567-656)

• Type III restriction enzyme, res subunit (ResIII) (261-424)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (513-538)

• Primosomal protein N C-terminal domain (PriA_C) (700-794)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Bacillus subtilis subsp. subtilis str. 168	48.447	100	0.489