Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | ACAK33_RS07955 | Genome accession | NZ_AP031588 |
| Coordinates | 1636435..1636950 (-) | Length | 171 a.a. |
| NCBI ID | WP_000477151.1 | Uniprot ID | V5VA61 |
| Organism | Acinetobacter baumannii strain JUNP712 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1631435..1641950
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACAK33_RS07930 (JUNP712_1576) | - | 1631981..1633624 (+) | 1644 | WP_000281764.1 | nitrite/sulfite reductase | - |
| ACAK33_RS07935 (JUNP712_1577) | - | 1633617..1634102 (+) | 486 | WP_000935247.1 | DUF934 domain-containing protein | - |
| ACAK33_RS07940 (JUNP712_1578) | - | 1634185..1634538 (+) | 354 | WP_000457783.1 | multidrug efflux SMR transporter | - |
| ACAK33_RS07945 (JUNP712_1579) | - | 1634581..1635024 (-) | 444 | WP_001176585.1 | VOC family protein | - |
| ACAK33_RS07950 (JUNP712_1581) | - | 1635151..1636326 (-) | 1176 | Protein_1522 | acetyl-CoA C-acyltransferase | - |
| ACAK33_RS07955 (JUNP712_1582) | fimT | 1636435..1636950 (-) | 516 | WP_000477151.1 | GspH/FimT family pseudopilin | Machinery gene |
| ACAK33_RS07960 (JUNP712_1583) | omp38 | 1637330..1638391 (+) | 1062 | WP_000777885.1 | outer membrane protein Omp38 | - |
| ACAK33_RS07965 (JUNP712_1584) | - | 1638514..1638657 (-) | 144 | WP_162138624.1 | hypothetical protein | - |
| ACAK33_RS07970 (JUNP712_1585) | - | 1638676..1639881 (-) | 1206 | WP_000512708.1 | RtcB family protein | - |
| ACAK33_RS07975 (JUNP712_1586) | - | 1640159..1641619 (-) | 1461 | WP_000004974.1 | amino acid permease | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19606.86 Da Isoelectric Point: 8.8196
>NTDB_id=98949 ACAK33_RS07955 WP_000477151.1 1636435..1636950(-) (fimT) [Acinetobacter baumannii strain JUNP712]
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
Nucleotide
Download Length: 516 bp
>NTDB_id=98949 ACAK33_RS07955 WP_000477151.1 1636435..1636950(-) (fimT) [Acinetobacter baumannii strain JUNP712]
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGCATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAACATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAT
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGCCATGTGCGCTTAGAAGAGCTTAAAAATTGTTAG
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGCATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAACATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAT
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGCCATGTGCGCTTAGAAGAGCTTAAAAATTGTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Acinetobacter baylyi ADP1 |
43.976 |
97.076 |
0.427 |