Detailed information    

insolico Bioinformatically predicted

Overview

Name   rexA   Type   Machinery gene
Locus tag   HMPREF9319_RS10795 Genome accession   NZ_GL397128
Coordinates   663667..663804 (+) Length   45 a.a.
NCBI ID   WP_003064141.1    Uniprot ID   E0PCT8
Organism   Streptococcus equinus ATCC 700338     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 658667..668804
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HMPREF9319_RS03200 (HMPREF9319_0659) - 659927..662114 (+) 2188 WP_003064133.1 alpha-galactosidase -
  HMPREF9319_RS03205 (HMPREF9319_0660) - 662133..663554 (+) 1422 WP_003064137.1 sucrose-specific PTS transporter subunit IIBC -
  HMPREF9319_RS10795 (HMPREF9319_0661) rexA 663667..663804 (+) 138 WP_003064141.1 hypothetical protein Machinery gene
  HMPREF9319_RS03210 (HMPREF9319_0662) - 663909..665054 (-) 1146 WP_003064144.1 cobalamin-independent methionine synthase II family protein -
  HMPREF9319_RS03215 (HMPREF9319_0663) - 665263..665997 (+) 735 WP_003064147.1 PHP domain-containing protein -
  HMPREF9319_RS03220 (HMPREF9319_0664) - 666011..666634 (+) 624 WP_041974315.1 alpha/beta fold hydrolase -
  HMPREF9319_RS10265 (HMPREF9319_0665) - 666712..666888 (-) 177 WP_003064151.1 DUF3042 family protein -
  HMPREF9319_RS03225 (HMPREF9319_0666) miaA 667077..667964 (+) 888 WP_003064153.1 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA -

Sequence

Protein


Download         Length: 45 a.a.        Molecular weight: 5219.04 Da        Isoelectric Point: 4.5379

>NTDB_id=989458 HMPREF9319_RS10795 WP_003064141.1 663667..663804(+) (rexA) [Streptococcus equinus ATCC 700338]
MIYWEEFDNKSIALVAEALSKSYDRKNVDKYLVLLGGEQLEVVKL

Nucleotide


Download         Length: 138 bp        

>NTDB_id=989458 HMPREF9319_RS10795 WP_003064141.1 663667..663804(+) (rexA) [Streptococcus equinus ATCC 700338]
TTGATCTACTGGGAGGAATTTGACAACAAAAGCATTGCTCTAGTTGCAGAAGCTCTCAGCAAGTCTTATGATAGAAAAAA
CGTTGATAAATACCTCGTTTTGCTTGGTGGCGAACAGCTAGAAGTTGTTAAACTATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E0PCT8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rexA Streptococcus pneumoniae R6

50

75.556

0.378