Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   HMPREF9319_RS03355 Genome accession   NZ_GL397128
Coordinates   694787..695269 (+) Length   160 a.a.
NCBI ID   WP_003064222.1    Uniprot ID   E0PCW9
Organism   Streptococcus equinus ATCC 700338     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 689787..700269
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HMPREF9319_RS03330 (HMPREF9319_0687) - 690451..691239 (+) 789 WP_003064208.1 Nif3-like dinuclear metal center hexameric protein -
  HMPREF9319_RS03335 (HMPREF9319_0688) rfbA 691424..692293 (+) 870 WP_013851675.1 glucose-1-phosphate thymidylyltransferase RfbA -
  HMPREF9319_RS03340 (HMPREF9319_0689) - 692293..692886 (+) 594 WP_003064215.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  HMPREF9319_RS03345 (HMPREF9319_0690) rfbB 693060..694109 (+) 1050 WP_003064218.1 dTDP-glucose 4,6-dehydratase -
  HMPREF9319_RS03350 (HMPREF9319_0691) - 694245..694667 (+) 423 WP_003064219.1 HD domain-containing protein -
  HMPREF9319_RS03355 (HMPREF9319_0692) mutX 694787..695269 (+) 483 WP_003064222.1 NUDIX hydrolase Machinery gene
  HMPREF9319_RS03360 (HMPREF9319_0693) - 695362..696549 (+) 1188 WP_003064225.1 AI-2E family transporter -
  HMPREF9319_RS03365 (HMPREF9319_0694) - 696539..697774 (+) 1236 WP_003064227.1 tetratricopeptide repeat protein -
  HMPREF9319_RS03375 (HMPREF9319_0696) kdpA 698272..700077 (+) 1806 WP_003064233.1 potassium-transporting ATPase subunit KdpA -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18783.05 Da        Isoelectric Point: 4.2866

>NTDB_id=989403 HMPREF9319_RS03355 WP_003064222.1 694787..695269(+) (mutX) [Streptococcus equinus ATCC 700338]
MTKLATICYIDNGEALLLLHRNKKPNDVHEGKWISVGGKLEVGETPDECAKREIFEETHFTVKEMDFKGVITFPEFTPGH
DWYTYVFKVTDFEGELISDEESREGTLEWVPYDQVLSKPTWEGDYEIFKWILDDVPFFSAKFTYDDEQRLVDKSVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=989403 HMPREF9319_RS03355 WP_003064222.1 694787..695269(+) (mutX) [Streptococcus equinus ATCC 700338]
ATGACAAAATTAGCAACGATTTGTTATATTGATAATGGTGAAGCGCTTTTGCTTTTACATCGCAATAAAAAACCAAATGA
TGTTCATGAAGGAAAATGGATTTCTGTTGGTGGTAAGCTAGAAGTAGGTGAGACACCAGATGAATGTGCGAAACGTGAGA
TTTTTGAGGAAACGCATTTTACTGTTAAAGAAATGGATTTCAAGGGAGTGATTACGTTTCCAGAATTCACACCAGGGCAT
GATTGGTACACTTATGTTTTCAAGGTAACCGATTTTGAGGGAGAATTGATTTCTGATGAAGAGTCACGTGAAGGAACTTT
AGAGTGGGTGCCTTACGACCAAGTTCTATCAAAACCGACTTGGGAGGGTGACTACGAAATTTTTAAATGGATTTTGGATG
ATGTGCCATTCTTTTCAGCTAAATTTACTTATGACGACGAACAGCGCTTGGTTGATAAAAGCGTGACATTTTATGATAAA
TGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E0PCW9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

69.811

99.375

0.694