Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   HMPREF9319_RS01685 Genome accession   NZ_GL397128
Coordinates   335569..336303 (+) Length   244 a.a.
NCBI ID   WP_003063479.1    Uniprot ID   A0A0W7V3J5
Organism   Streptococcus equinus ATCC 700338     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 330569..341303
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HMPREF9319_RS01660 (HMPREF9319_0330) - 330684..330983 (+) 300 WP_003063470.1 PTS sugar transporter subunit IIB -
  HMPREF9319_RS01665 (HMPREF9319_0331) - 331011..332369 (+) 1359 WP_003063472.1 PTS ascorbate transporter subunit IIC -
  HMPREF9319_RS01670 (HMPREF9319_0332) fsa 332383..333036 (+) 654 WP_003063474.1 fructose-6-phosphate aldolase -
  HMPREF9319_RS01675 (HMPREF9319_0333) recP/tkt 333126..335111 (+) 1986 WP_003063475.1 transketolase Machinery gene
  HMPREF9319_RS01680 (HMPREF9319_0334) - 335252..335554 (+) 303 WP_003063477.1 bacteriocin immunity protein -
  HMPREF9319_RS01685 (HMPREF9319_0335) pptA 335569..336303 (+) 735 WP_003063479.1 ABC transporter ATP-binding protein Regulator
  HMPREF9319_RS01690 (HMPREF9319_0336) - 336308..337933 (+) 1626 WP_003063481.1 hypothetical protein -
  HMPREF9319_RS01695 (HMPREF9319_0337) proB 338035..338838 (+) 804 WP_041974199.1 glutamate 5-kinase -
  HMPREF9319_RS01700 (HMPREF9319_0338) - 338853..340103 (+) 1251 WP_041974196.1 glutamate-5-semialdehyde dehydrogenase -
  HMPREF9319_RS01705 (HMPREF9319_0339) rsmH 340254..341204 (+) 951 WP_287179920.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 27380.17 Da        Isoelectric Point: 4.5138

>NTDB_id=989376 HMPREF9319_RS01685 WP_003063479.1 335569..336303(+) (pptA) [Streptococcus equinus ATCC 700338]
MIRFDHVSKLYGDKEALSDVNMTIANGEIFGLIGHNGAGKTTTISILTSIIEASYGEVYVDELPLSEHRDDIKKRIGYVP
DSPDIFLNLTAIEYWHFLAKIYDVDDKLTDERIERLSHLFDIAENINDLIDSFSHGMRQKVILIGALISNPDIWILDEPL
TGLDPQASFDLKEMMKEHARGGNTVLFSTHVLAVAEQLCDRIGILKDGKLIFIGTLDELKANHPDKDLETIYLELAGRKA
QEEG

Nucleotide


Download         Length: 735 bp        

>NTDB_id=989376 HMPREF9319_RS01685 WP_003063479.1 335569..336303(+) (pptA) [Streptococcus equinus ATCC 700338]
ATGATTCGATTTGATCATGTTTCAAAGTTGTATGGTGATAAGGAAGCGCTAAGTGATGTCAATATGACCATTGCTAATGG
CGAAATTTTTGGCTTGATTGGGCATAATGGTGCAGGAAAAACAACGACGATTAGCATTTTAACGTCAATCATTGAAGCGA
GCTATGGTGAGGTATATGTTGATGAGTTACCTCTTTCTGAGCACCGTGATGATATCAAAAAACGCATTGGTTATGTGCCT
GATTCACCTGATATTTTCCTGAATTTGACGGCGATAGAATACTGGCATTTTTTAGCTAAAATTTATGACGTTGATGATAA
GCTCACTGATGAACGGATTGAACGATTGTCACATTTGTTTGATATTGCGGAGAATATCAATGATTTGATTGATAGTTTTT
CACACGGTATGCGTCAAAAAGTGATTCTTATTGGTGCTCTGATATCAAATCCAGATATTTGGATTTTAGATGAACCTTTG
ACAGGACTTGACCCACAGGCATCTTTTGATTTGAAAGAAATGATGAAAGAGCACGCGCGTGGTGGCAATACGGTTCTTTT
CTCAACACATGTTCTTGCTGTTGCGGAGCAACTTTGTGACCGTATTGGAATTTTAAAAGATGGCAAGTTGATTTTTATCG
GCACCTTAGATGAATTGAAAGCTAATCATCCTGATAAAGATTTAGAAACAATCTATCTTGAATTAGCAGGGCGTAAAGCG
CAAGAGGAGGGCTAG

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0W7V3J5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

36.975

97.541

0.361
  pptA Streptococcus salivarius strain HSISS4

36.975

97.541

0.361

Multiple sequence alignment