Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | AAG068_RS09750 | Genome accession | NZ_CP152427 |
| Coordinates | 1888918..1889205 (+) | Length | 95 a.a. |
| NCBI ID | WP_000648329.1 | Uniprot ID | A0A2A7D356 |
| Organism | Bacillus paramycoides strain JYZ-SD5 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1883918..1894205
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAG068_RS09730 (AAG068_09730) | - | 1885096..1885293 (+) | 198 | WP_342719114.1 | DUF4083 domain-containing protein | - |
| AAG068_RS09735 (AAG068_09735) | - | 1885324..1885785 (+) | 462 | WP_048527390.1 | NUDIX hydrolase | - |
| AAG068_RS09740 (AAG068_09740) | nadE | 1885834..1886652 (-) | 819 | WP_000174883.1 | ammonia-dependent NAD(+) synthetase | - |
| AAG068_RS09745 (AAG068_09745) | - | 1886923..1888803 (+) | 1881 | WP_342719115.1 | ABC transporter permease | - |
| AAG068_RS09750 (AAG068_09750) | abrB | 1888918..1889205 (+) | 288 | WP_000648329.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| AAG068_RS09755 (AAG068_09755) | - | 1889514..1890464 (+) | 951 | WP_342719116.1 | serine protease | - |
| AAG068_RS09760 (AAG068_09760) | - | 1890504..1890812 (-) | 309 | WP_098669039.1 | helix-turn-helix transcriptional regulator | - |
| AAG068_RS09765 (AAG068_09765) | - | 1890922..1891855 (+) | 934 | Protein_1834 | aldo/keto reductase | - |
| AAG068_RS09770 (AAG068_09770) | - | 1892058..1893233 (+) | 1176 | WP_342719117.1 | MFS transporter | - |
| AAG068_RS09775 (AAG068_09775) | - | 1893282..1893483 (+) | 202 | Protein_1836 | hypothetical protein | - |
| AAG068_RS09780 (AAG068_09780) | - | 1893531..1893755 (-) | 225 | WP_000162601.1 | hypothetical protein | - |
| AAG068_RS09785 (AAG068_09785) | - | 1893840..1894187 (-) | 348 | WP_000426320.1 | DUF4257 domain-containing protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10591.31 Da Isoelectric Point: 6.9795
>NTDB_id=989320 AAG068_RS09750 WP_000648329.1 1888918..1889205(+) (abrB) [Bacillus paramycoides strain JYZ-SD5]
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSNQNISLANGNITVSIDGAK
HLIKEIEKFLNKSEA
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSNQNISLANGNITVSIDGAK
HLIKEIEKFLNKSEA
Nucleotide
Download Length: 288 bp
>NTDB_id=989320 AAG068_RS09750 WP_000648329.1 1888918..1889205(+) (abrB) [Bacillus paramycoides strain JYZ-SD5]
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATTCCTAAAGAATTACGTGATGTATTGGG
GATACAAATCAAATCACCGCTTGAAATTTTCGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAAATCAAAACATATCATTAGCAAATGGAAACATTACTGTTAGTATAGATGGAGCGAAA
CATCTCATAAAAGAAATAGAGAAGTTTTTAAATAAGAGTGAGGCTTAG
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATTCCTAAAGAATTACGTGATGTATTGGG
GATACAAATCAAATCACCGCTTGAAATTTTCGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAAATCAAAACATATCATTAGCAAATGGAAACATTACTGTTAGTATAGATGGAGCGAAA
CATCTCATAAAAGAAATAGAGAAGTTTTTAAATAAGAGTGAGGCTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
54.444 |
94.737 |
0.516 |