Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AAG068_RS05990 Genome accession   NZ_CP152427
Coordinates   1160487..1160663 (+) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus paramycoides strain JYZ-SD5     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1155487..1165663
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAG068_RS05970 (AAG068_05970) clpB 1155825..1158425 (+) 2601 WP_342718539.1 ATP-dependent chaperone ClpB -
  AAG068_RS05975 (AAG068_05975) - 1158458..1158640 (-) 183 WP_001211116.1 YjzD family protein -
  AAG068_RS05980 (AAG068_05980) - 1158797..1159531 (+) 735 WP_029437835.1 hydrolase -
  AAG068_RS05985 (AAG068_05985) - 1159561..1160433 (+) 873 WP_342718540.1 NAD(P)-dependent oxidoreductase -
  AAG068_RS05990 (AAG068_05990) comZ 1160487..1160663 (+) 177 WP_009879752.1 ComZ family protein Regulator
  AAG068_RS05995 (AAG068_05995) fabH 1160897..1161829 (+) 933 WP_001100539.1 beta-ketoacyl-ACP synthase III -
  AAG068_RS06000 (AAG068_06000) fabF 1161860..1163098 (+) 1239 WP_000412651.1 beta-ketoacyl-ACP synthase II -
  AAG068_RS06005 (AAG068_06005) - 1163205..1163993 (+) 789 WP_342718541.1 DUF2268 domain-containing putative Zn-dependent protease -
  AAG068_RS06010 (AAG068_06010) - 1164137..1164883 (+) 747 WP_048553970.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=989312 AAG068_RS05990 WP_009879752.1 1160487..1160663(+) (comZ) [Bacillus paramycoides strain JYZ-SD5]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=989312 AAG068_RS05990 WP_009879752.1 1160487..1160663(+) (comZ) [Bacillus paramycoides strain JYZ-SD5]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCGCTTGATATGGAAAAAGCACAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment