Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   AAFQ93_RS03815 Genome accession   NZ_CP152419
Coordinates   798737..799468 (+) Length   243 a.a.
NCBI ID   WP_070460224.1    Uniprot ID   A0A1F0BDK4
Organism   Streptococcus nidrosiense strain SO-23-1     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 793737..804468
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAFQ93_RS03790 (AAFQ93_03780) - 795099..795731 (+) 633 WP_223140576.1 DJ-1/PfpI family protein -
  AAFQ93_RS03795 (AAFQ93_03785) dnaJ 796000..797136 (+) 1137 WP_049504307.1 molecular chaperone DnaJ -
  AAFQ93_RS03800 (AAFQ93_03790) - 797223..797876 (-) 654 WP_375555662.1 hypothetical protein -
  AAFQ93_RS03805 (AAFQ93_03795) - 797962..798249 (-) 288 WP_375555663.1 hypothetical protein -
  AAFQ93_RS03810 (AAFQ93_03800) - 798259..798669 (-) 411 WP_375555664.1 HIT family protein -
  AAFQ93_RS03815 (AAFQ93_03805) pptA 798737..799468 (+) 732 WP_070460224.1 ABC transporter ATP-binding protein Regulator
  AAFQ93_RS03820 (AAFQ93_03810) - 799465..800514 (+) 1050 WP_375555665.1 ABC transporter permease -
  AAFQ93_RS03825 (AAFQ93_03815) - 800636..800758 (-) 123 WP_375555666.1 hypothetical protein -
  AAFQ93_RS03830 (AAFQ93_03820) ccrZ 800957..801751 (+) 795 WP_000362994.1 cell cycle regulator CcrZ -
  AAFQ93_RS03835 (AAFQ93_03825) trmB 801748..802383 (+) 636 WP_049508543.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  AAFQ93_RS03840 (AAFQ93_03830) rimP 802510..802989 (+) 480 WP_000338687.1 ribosome maturation factor RimP -
  AAFQ93_RS03845 (AAFQ93_03835) nusA 803032..804168 (+) 1137 WP_000032287.1 transcription termination factor NusA -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27198.62 Da        Isoelectric Point: 4.8919

>NTDB_id=989162 AAFQ93_RS03815 WP_070460224.1 798737..799468(+) (pptA) [Streptococcus nidrosiense strain SO-23-1]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLTPYSGEINIDGLTLGANPREYRQQIGYIP
ETPSLYEELTLREHIETVAMAYGIERNLAFERVESLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAISDLIQLLDLEKKKGKSILMSTHVLDSAEKMCDSFVILHKGQVRAKGDLEELRQAFAMPQASLNDIYLALTKE
EDR

Nucleotide


Download         Length: 732 bp        

>NTDB_id=989162 AAFQ93_RS03815 WP_070460224.1 798737..799468(+) (pptA) [Streptococcus nidrosiense strain SO-23-1]
ATGTTAGAAATTAAAAACCTGACTGGGGGCTATGTTCATGTTCCTGTCTTGAAAGATGTGTCCTTTACAGTCGAGAGTGG
ACAGTTGGTCGGTTTGATCGGTCTCAATGGTGCAGGAAAATCAACGACCATCAATGAAATTATTGGTTTGTTGACACCTT
ATAGTGGAGAAATAAACATCGACGGGCTAACCTTAGGTGCTAATCCTCGTGAATATCGTCAGCAGATTGGTTATATTCCT
GAAACTCCTAGTTTGTACGAGGAATTGACTCTCAGAGAACATATCGAGACGGTTGCTATGGCCTATGGTATTGAGCGAAA
TCTAGCTTTTGAACGTGTAGAATCGCTTTTAAAAATGTTCCGTTTGGATCAGAAATTAGACTGGTTCCCAGTTCATTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCCTTTGTCGTGGATCCGAGTCTCTTTATCGTCGATGAACCTTTC
CTTGGTCTTGATCCCTTGGCAATTTCAGACTTGATTCAGCTTTTGGATCTTGAAAAGAAAAAAGGCAAGTCTATCCTCAT
GAGTACCCACGTTCTTGACTCTGCTGAAAAAATGTGTGATTCTTTTGTTATTCTTCACAAAGGACAAGTGAGAGCTAAAG
GGGATCTTGAAGAGTTGAGACAAGCTTTTGCCATGCCTCAAGCAAGTCTCAATGATATCTATTTGGCTTTGACCAAAGAG
GAGGACCGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1F0BDK4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.689

99.177

0.741
  pptA Streptococcus thermophilus LMD-9

73.444

99.177

0.728

Multiple sequence alignment