Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   AAHH81_RS08415 Genome accession   NZ_CP152418
Coordinates   1668377..1669087 (+) Length   236 a.a.
NCBI ID   WP_000760673.1    Uniprot ID   A0A062WVH4
Organism   Streptococcus pneumoniae strain 20234287     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1663377..1674087
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHH81_RS08400 (AAHH81_08385) - 1664032..1664280 (-) 249 WP_000364990.1 YneF family protein -
  AAHH81_RS08405 (AAHH81_08390) treC 1664422..1666047 (-) 1626 WP_061813515.1 alpha,alpha-phosphotrehalase -
  AAHH81_RS08410 (AAHH81_08395) treP 1666225..1668192 (-) 1968 WP_061813516.1 PTS system trehalose-specific EIIBC component -
  AAHH81_RS08415 (AAHH81_08400) treR 1668377..1669087 (+) 711 WP_000760673.1 trehalose operon repressor Regulator
  AAHH81_RS08420 (AAHH81_08405) - 1669119..1669922 (-) 804 WP_050091315.1 ABC transporter ATP-binding protein -
  AAHH81_RS08425 (AAHH81_08410) - 1669935..1670812 (-) 878 Protein_1666 ABC transporter permease -
  AAHH81_RS08430 (AAHH81_08415) - 1670824..1671633 (-) 810 Protein_1667 ABC transporter substrate-binding protein -
  AAHH81_RS08435 (AAHH81_08420) amiF 1672250..1673176 (-) 927 WP_001291293.1 ATP-binding cassette domain-containing protein Regulator

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27607.78 Da        Isoelectric Point: 8.9698

>NTDB_id=989082 AAHH81_RS08415 WP_000760673.1 1668377..1669087(+) (treR) [Streptococcus pneumoniae strain 20234287]
MKKYQQLFKQIQETIQNETYAVGDFLPSEHDLMEQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVKELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIENGLKLLIDYAQKEITIDHSSDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFRFVDFAKRKK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=989082 AAHH81_RS08415 WP_000760673.1 1668377..1669087(+) (treR) [Streptococcus pneumoniae strain 20234287]
ATGAAGAAATACCAACAATTATTTAAGCAAATCCAAGAAACCATTCAAAACGAGACTTACGCTGTCGGAGATTTCCTTCC
TAGCGAGCACGACCTTATGGAGCAATATCAAGTGAGTCGTGATACCGTCCGAAAGGCCCTGTCTCTCCTCCAAGAGGAAG
GATTGATCAAAAAGATAAGAGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTATCCAACCTAACC
AGCTACCAAGAACTAGTTAAAGAACTTGGACTGCGCTCTAAAACCAACGTGGTCAGTCTGGACAAGATTATTATTGATAA
AAAATCCTCACTGATAACCGGTTTCCCAGAGTTTCGGATGGTTTGGAAGGTGGTCCGCCAGCGTGTGGTGGATGATCTGG
TATCCGTTCTGGATACGGACTATCTGGATATGGAACTAATCCCAAATCTCACTCGCCAAATTGCTGAGCAGTCTATCTAT
TCTTATATAGAAAATGGCCTCAAACTCCTTATTGATTATGCTCAGAAGGAAATCACCATTGACCACTCAAGCGACCGAGA
CAAGATTCTCATGGACATTGGCAAAGACCCTTATGTCGTTTCGATTAAATCAAAAGTCTATCTCCAAGACGGACGCCAAT
TTCAGTTTACCGAAAGTCGCCATAAGTTAGAAAAATTTAGATTTGTAGATTTTGCAAAACGCAAGAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A062WVH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.322

100

0.593

Multiple sequence alignment