Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   AAHH81_RS02655 Genome accession   NZ_CP152418
Coordinates   513532..513798 (+) Length   88 a.a.
NCBI ID   WP_001811621.1    Uniprot ID   A0AAP5J8I9
Organism   Streptococcus pneumoniae strain 20234287     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 508532..518798
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHH81_RS02635 (AAHH81_02630) - 508638..509147 (+) 510 WP_000619941.1 GNAT family N-acetyltransferase -
  AAHH81_RS02640 (AAHH81_02635) pheT 509224..511629 (+) 2406 WP_000961595.1 phenylalanine--tRNA ligase subunit beta -
  AAHH81_RS02645 (AAHH81_02640) - 511802..512803 (-) 1002 WP_061813550.1 endonuclease/exonuclease/phosphatase family protein -
  AAHH81_RS02650 (AAHH81_02645) - 512959..513447 (+) 489 Protein_521 transposase -
  AAHH81_RS02655 (AAHH81_02650) HI0659 513532..513798 (+) 267 WP_001811621.1 helix-turn-helix domain-containing protein Machinery gene
  AAHH81_RS02660 (AAHH81_02655) metE 514058..516307 (+) 2250 WP_061813549.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  AAHH81_RS02665 (AAHH81_02660) metF 516371..517237 (+) 867 WP_000089968.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9560.13 Da        Isoelectric Point: 4.8274

>NTDB_id=989058 AAHH81_RS02655 WP_001811621.1 513532..513798(+) (HI0659) [Streptococcus pneumoniae strain 20234287]
MEGCLSELFSKEEILESDMRVAIMSELIEARNKQGISQKKLEEVSGVSQPVIARMETGKTSPQLDTVLKVLASLGKTLAV
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=989058 AAHH81_RS02655 WP_001811621.1 513532..513798(+) (HI0659) [Streptococcus pneumoniae strain 20234287]
TTGGAAGGATGTCTATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTAGCTATCATGAGCGAGTT
GATTGAAGCCAGAAATAAGCAAGGAATCAGTCAGAAAAAGCTAGAGGAAGTCAGTGGAGTGAGTCAGCCTGTTATAGCTA
GGATGGAGACAGGTAAGACTAGTCCACAGTTGGACACAGTCTTAAAAGTCCTAGCTAGTCTAGGAAAGACACTAGCAGTC
GTTCCACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(28-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

61.039

87.5

0.534

Multiple sequence alignment