Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   ACNR93_RS00270 Genome accession   NZ_CP184736
Coordinates   33400..34155 (+) Length   251 a.a.
NCBI ID   WP_420543648.1    Uniprot ID   -
Organism   Streptococcus equinus strain NM-2-29     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 28400..39155
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNR93_RS00250 (ACNR93_00250) mreD 28983..29489 (+) 507 WP_029876012.1 rod shape-determining protein MreD -
  ACNR93_RS00255 (ACNR93_00255) - 29591..30946 (+) 1356 WP_420543647.1 PcsB-like coiled-coil domain-containing protein -
  ACNR93_RS00260 (ACNR93_00260) - 31077..32048 (+) 972 WP_003067288.1 ribose-phosphate diphosphokinase -
  ACNR93_RS00265 (ACNR93_00265) - 32235..33410 (+) 1176 WP_021141384.1 pyridoxal phosphate-dependent aminotransferase -
  ACNR93_RS00270 (ACNR93_00270) recO 33400..34155 (+) 756 WP_420543648.1 DNA repair protein RecO Machinery gene
  ACNR93_RS00275 (ACNR93_00275) plsX 34291..35286 (+) 996 WP_027968255.1 phosphate acyltransferase PlsX -
  ACNR93_RS00280 (ACNR93_00280) - 35304..35546 (+) 243 WP_003067281.1 acyl carrier protein -
  ACNR93_RS00285 (ACNR93_00285) purC 35671..36381 (+) 711 WP_039696061.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -

Sequence

Protein


Download         Length: 251 a.a.        Molecular weight: 29194.52 Da        Isoelectric Point: 6.4978

>NTDB_id=988841 ACNR93_RS00270 WP_420543648.1 33400..34155(+) (recO) [Streptococcus equinus strain NM-2-29]
MQTKETYGLVLYNRNYREDDKLVKIFTETDGKHMFFVRHAGKSRFNSVIQPLTIAKFIVKINDNGLSFIEDYKEVASFKE
INADLFKLSYASYVTSLADAAVPDNVADSQLFAFLNKTLSLMEEGLDYEILTNIFEIQILERFGISLNLHECAFCHRVGL
PFDFSHKYTGLLCPEHYAKDEHRSHVDPNILYLLDRFQAIQFDELKTISVKPDMKRKLRLFIDDIYDNYVGVRLKSKKFI
DDLGSWGNIMK

Nucleotide


Download         Length: 756 bp        

>NTDB_id=988841 ACNR93_RS00270 WP_420543648.1 33400..34155(+) (recO) [Streptococcus equinus strain NM-2-29]
ATGCAAACTAAAGAAACTTATGGTCTTGTCCTTTATAATCGCAATTATCGCGAGGATGACAAACTAGTTAAGATTTTTAC
AGAAACAGATGGCAAGCATATGTTTTTTGTGAGACATGCGGGAAAATCTCGTTTTAATTCTGTGATTCAGCCGTTGACCA
TTGCTAAATTTATCGTAAAGATTAACGACAATGGTTTGTCGTTCATCGAGGATTATAAGGAAGTGGCTTCGTTTAAGGAA
ATCAATGCTGATTTATTTAAATTGTCATATGCTTCTTATGTAACTTCTTTGGCTGATGCTGCTGTGCCTGATAATGTGGC
TGATTCGCAGTTGTTTGCTTTTTTGAACAAGACTTTATCTTTGATGGAAGAGGGTCTTGATTATGAAATCTTGACGAATA
TCTTTGAGATTCAGATTTTGGAGCGCTTTGGTATTAGTCTGAATCTGCATGAATGTGCATTTTGTCATCGTGTAGGACTT
CCTTTTGATTTTTCTCATAAGTATACTGGCTTGCTTTGCCCAGAGCATTATGCAAAAGATGAGCATCGAAGTCATGTTGA
TCCAAATATACTTTATCTCCTTGATCGTTTTCAAGCCATTCAATTTGATGAGTTAAAGACAATTTCGGTTAAACCTGACA
TGAAACGAAAACTGCGTTTATTTATCGATGATATCTATGATAACTATGTCGGTGTTCGATTGAAGAGTAAGAAGTTCATC
GATGATTTAGGTTCTTGGGGAAATATTATGAAATAA

Domains

Predicted by InterProScan.

Recombination protein O N terminal (RecO_N)

(1-78)

Recombination protein O C terminal (RecO_C)

(84-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Streptococcus pneumoniae R6

64.143

100

0.641

Multiple sequence alignment