Detailed information NTG0988655

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: WN937_RS01280
• Genome accession: NZ_CP152363
• Coordinates: 268159..269166 (-)
• Length: 335 a.a.
• NCBI ID: WP_005481416.1
• Uniprot ID: A0A072GUT1
• Organism: Vibrio parahaemolyticus strain vp-HL-201910
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 263159..274166

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WN937_RS01245 (WN937_01245)	-	263337..263768 (-)	432	WP_017633432.1	DUF2787 family protein	-
WN937_RS01250 (WN937_01250)	radC	263765..264238 (-)	474	WP_025792561.1	DNA repair protein RadC	-
WN937_RS01255 (WN937_01255)	-	264409..264558 (+)	150	WP_005489496.1	AlpA family phage regulatory protein	-
WN937_RS01260 (WN937_01260)	-	264718..264942 (+)	225	WP_005489715.1	hypothetical protein	-
WN937_RS01265 (WN937_01265)	hslU	265366..266697 (-)	1332	WP_005489452.1	HslU--HslV peptidase ATPase subunit	-
WN937_RS01270 (WN937_01270)	hslV	266721..267272 (-)	552	WP_005489705.1	ATP-dependent protease subunit HslV	-
WN937_RS01275 (WN937_01275)	ftsN	267437..267982 (-)	546	WP_005481405.1	cell division protein FtsN	-
WN937_RS01280 (WN937_01280)	cytR	268159..269166 (-)	1008	WP_005481416.1	DNA-binding transcriptional regulator CytR	Regulator
WN937_RS01285 (WN937_01285)	priA	269499..271703 (-)	2205	WP_029824531.1	primosomal protein N'	-
WN937_RS01290 (WN937_01290)	rpmE	271998..272219 (+)	222	WP_005457203.1	50S ribosomal protein L31	-
WN937_RS01295 (WN937_01295)	rpsJ	272677..272988 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
WN937_RS01300 (WN937_01300)	rplC	273003..273632 (+)	630	WP_005456132.1	50S ribosomal protein L3	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36835.35 Da
• Isoelectric Point: 6.4938

>NTDB_id=988655 WN937_RS01280 WP_005481416.1 268159..269166(-) (cytR) [Vibrio parahaemolyticus strain vp-HL-201910]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKDPQYSVITEFSFDGGAKAVRKLLELPEPPTA
IFCHCDTMAIGAIQEAKRLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPQRA

Nucleotide

• Length: 1008 bp

>NTDB_id=988655 WN937_RS01280 WP_005481416.1 268159..269166(-) (cytR) [Vibrio parahaemolyticus strain vp-HL-201910]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTCGACAGCTACGGTATCTCGAGCATTAATGAATCCAGAAAA
AGTCTCTTCTTCAACAAGAAAAAGAGTCGAAGATGCCGTGCTTGAAGCGGGCTATTCTCCAAATTCATTAGCGCGTAATC
TACGTAGAAACGAATCAAAAACGATTGTTACCATCGTTCCTGACATCTGTGATCCTTACTTTTCTGAAATCATTCGTGGT
ATCGAAGACGCCGCTATGGAACATGGCTACCTCGTACTGCTCGGTGACAGCGGCCAGCAGAAAAAGCGTGAAAGCTCATT
TGTGAATCTAGTGTTCACCAAACAAGCCGATGGCATGTTACTGCTTGGCACCGACCTGCCATTTGATGTCAGCAAGCCAG
AACAGAAAAACCTGCCACCAATGGTCATGGCTTGTGAGTTTGCGCCAGAGCTAGAATTACCAACCGTGCACATTGACAAC
CTAACGTCTGCTTTTGAAGCGGTCAATTACCTAACTCAACTTGGCCATAAACGCATAGCACAAATTTCAGGGCCAGACAC
AGCGGTATTGTGCCAGTTCCGCCAGCAAGGTTATCAACAAGCCTTGCGTCGCGCGGGGATCAGTAAAGACCCACAATACA
GCGTTATCACTGAGTTTTCTTTTGACGGCGGCGCGAAAGCTGTACGTAAGTTGCTAGAACTTCCAGAGCCACCAACTGCG
ATTTTCTGCCACTGTGACACCATGGCAATCGGCGCAATCCAAGAAGCGAAACGACTCGGTCTGCGCGTTCCGCAAGATTT
GTCAGTGGTTGGTTTCGATGATATCAACTTTGCTCAATACTGCGATCCACCGTTAACAACCATTTCTCAACCTCGTTATG
AAATTGGCCGCCAAGCGATGCTTATGATGCTCGAACTCCTTAAAGGCCATGACGTTCATTCAGGTTCACGCTTACTAGAA
ACTAAGCTTGTTGTCCGTGGTAGCGCAGCGCCACCGCAACGCGCCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A072GUT1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	100	100	1
cytR	Vibrio cholerae C6706	90.719	99.701	0.904