Detailed information    

insolico Bioinformatically predicted

Overview


Name   kre   Type   Regulator
Locus tag   AAC934_RS07580 Genome accession   NZ_CP152362
Coordinates   1441811..1442275 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain LP     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1436811..1447275
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAC934_RS07560 (AAC934_07560) kinA 1437277..1439097 (+) 1821 WP_088325773.1 sporulation histidine kinase KinA -
  AAC934_RS07565 (AAC934_07565) dapX 1439108..1440289 (-) 1182 WP_014479654.1 aminotransferase A -
  AAC934_RS07570 (AAC934_07570) - 1440491..1440652 (-) 162 WP_128992753.1 hypothetical protein -
  AAC934_RS07575 (AAC934_07575) cheV 1440856..1441767 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  AAC934_RS07580 (AAC934_07580) kre 1441811..1442275 (-) 465 WP_003232406.1 YkyB family protein Regulator
  AAC934_RS07585 (AAC934_07585) ykuC 1442401..1443693 (-) 1293 WP_029727007.1 MFS transporter -
  AAC934_RS07590 (AAC934_07590) ltdD 1443769..1444263 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  AAC934_RS07595 (AAC934_07595) ppeE 1444315..1445178 (-) 864 WP_029727008.1 metallophosphoesterase -
  AAC934_RS07600 (AAC934_07600) fadH 1445321..1446085 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence


Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=988604 AAC934_RS07580 WP_003232406.1 1441811..1442275(-) (kre) [Bacillus subtilis strain LP]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=988604 AAC934_RS07580 WP_003232406.1 1441811..1442275(-) (kre) [Bacillus subtilis strain LP]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains


Predicted by InterproScan.

(14-128)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment