Detailed information    

insolico Bioinformatically predicted

Overview


Name   comZ   Type   Regulator
Locus tag   AAC934_RS06085 Genome accession   NZ_CP152362
Coordinates   1174487..1174678 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain LP     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context


Location: 1169487..1179678
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAC934_RS06055 (AAC934_06055) argF 1170352..1171311 (+) 960 WP_076457865.1 ornithine carbamoyltransferase -
  AAC934_RS06060 (AAC934_06060) yjzC 1171397..1171576 (+) 180 WP_003245356.1 YjzC family protein -
  AAC934_RS06065 (AAC934_06065) yjzD 1171622..1171807 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  AAC934_RS06070 (AAC934_06070) - 1172056..1172790 (+) 735 WP_032721340.1 hypothetical protein -
  AAC934_RS06075 (AAC934_06075) - 1172872..1173429 (+) 558 WP_038428783.1 hypothetical protein -
  AAC934_RS06080 (AAC934_06080) med 1173519..1174472 (+) 954 WP_032721344.1 transcriptional regulator Med Regulator
  AAC934_RS06085 (AAC934_06085) comZ 1174487..1174678 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  AAC934_RS06090 (AAC934_06090) yjzB 1174708..1174947 (-) 240 WP_003232972.1 spore coat protein YjzB -
  AAC934_RS06095 (AAC934_06095) fabH 1175112..1176050 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  AAC934_RS06100 (AAC934_06100) fabF 1176073..1177314 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  AAC934_RS06105 (AAC934_06105) yjaZ 1177390..1178175 (+) 786 WP_003232967.1 DUF2268 domain-containing protein -
  AAC934_RS06110 (AAC934_06110) appD 1178367..1179353 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=988596 AAC934_RS06085 WP_003224559.1 1174487..1174678(+) (comZ) [Bacillus subtilis strain LP]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=988596 AAC934_RS06085 WP_003224559.1 1174487..1174678(+) (comZ) [Bacillus subtilis strain LP]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains


Predicted by InterproScan.

(4-58)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment