Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   AAC934_RS04560 Genome accession   NZ_CP152362
Coordinates   892565..893359 (+) Length   264 a.a.
NCBI ID   WP_342624826.1    Uniprot ID   -
Organism   Bacillus subtilis strain LP     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 887565..898359
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAC934_RS04530 (AAC934_04530) sxzA 888404..889435 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  AAC934_RS04535 (AAC934_04535) yfhB 889550..890431 (+) 882 WP_032723009.1 PhzF family phenazine biosynthesis isomerase -
  AAC934_RS04540 (AAC934_04540) yfhC 890519..891103 (+) 585 WP_003243940.1 nitroreductase -
  AAC934_RS04545 (AAC934_04545) yfhD 891142..891333 (-) 192 WP_003233561.1 YfhD family protein -
  AAC934_RS04550 (AAC934_04550) yfhE 891400..891510 (-) 111 WP_003223230.1 YfhE family protein -
  AAC934_RS04555 (AAC934_04555) yfhF 891565..892476 (-) 912 WP_198878901.1 TIGR01777 family oxidoreductase -
  AAC934_RS04560 (AAC934_04560) recX 892565..893359 (+) 795 WP_342624826.1 recombination regulator RecX Regulator
  AAC934_RS04565 (AAC934_04565) yfhH 893361..893675 (+) 315 WP_003244592.1 YfhH family protein -
  AAC934_RS04570 (AAC934_04570) yfhI 893818..895011 (+) 1194 WP_003243500.1 MFS transporter -
  AAC934_RS04575 (AAC934_04575) sspK 895043..895195 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  AAC934_RS04580 (AAC934_04580) yfhJ 895320..895589 (+) 270 WP_003243789.1 YfhJ family protein -
  AAC934_RS04585 (AAC934_04585) yfhK 895734..896252 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  AAC934_RS04590 (AAC934_04590) spdL 896337..896669 (+) 333 WP_042975174.1 SdpC immunity protein SpdL -
  AAC934_RS04595 (AAC934_04595) ephM 896656..897516 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31035.30 Da        Isoelectric Point: 6.9886

>NTDB_id=988587 AAC934_RS04560 WP_342624826.1 892565..893359(+) (recX) [Bacillus subtilis strain LP]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNYYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEC

Nucleotide


Download         Length: 795 bp        

>NTDB_id=988587 AAC934_RS04560 WP_342624826.1 892565..893359(+) (recX) [Bacillus subtilis strain LP]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACTATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAACTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.24

99.621

0.989

Multiple sequence alignment