Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AAG689_RS00980 Genome accession   NZ_CP152342
Coordinates   218995..219399 (+) Length   134 a.a.
NCBI ID   WP_406624402.1    Uniprot ID   -
Organism   Acidovorax sp. SDU_ACID1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 213995..224399
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAG689_RS00965 hemL 216443..217753 (-) 1311 WP_406624401.1 glutamate-1-semialdehyde 2,1-aminomutase -
  AAG689_RS00970 - 217737..218675 (-) 939 WP_020230816.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  AAG689_RS00975 - 218791..218943 (+) 153 WP_406626257.1 rubredoxin -
  AAG689_RS00980 pilG 218995..219399 (+) 405 WP_406624402.1 PleD family two-component system response regulator Regulator
  AAG689_RS00985 - 219399..219764 (+) 366 WP_011794058.1 PleD family two-component system response regulator -
  AAG689_RS00990 - 219785..220312 (+) 528 WP_020230814.1 chemotaxis protein CheW -
  AAG689_RS00995 - 220359..222626 (+) 2268 WP_406624403.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14865.11 Da        Isoelectric Point: 6.9235

>NTDB_id=988485 AAG689_RS00980 WP_406624402.1 218995..219399(+) (pilG) [Acidovorax sp. SDU_ACID1]
MATTTTGPTFRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALAKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNVR
FADTPVVMLSSKDGVFDKARGRMVGCQEYLTKPFTKDQLLQAVQQFGNAQQGAM

Nucleotide


Download         Length: 405 bp        

>NTDB_id=988485 AAG689_RS00980 WP_406624402.1 218995..219399(+) (pilG) [Acidovorax sp. SDU_ACID1]
TTGGCTACGACAACAACCGGCCCCACGTTCAGGGTCCTCGTGGTGGATGACAGCAATACGATCCGGCGCAGCGCCGAGAT
CTTCCTCAAGCAGGGGGGGCACGAGGTGCTGCTGGCCGACGACGGCTTCGATGCCTTGGCCAAAGTCAACGATTACCAGC
CGCAATTGATTTTCTGCGACATCCTGATGCCCAAGCTCGATGGTTATCAGACCTGCGCCATCATCAAGCGCAATGTCCGT
TTCGCGGATACCCCGGTGGTGATGCTGTCGTCCAAGGATGGAGTTTTCGACAAGGCGCGCGGCCGCATGGTCGGCTGCCA
GGAATATCTCACCAAACCATTTACCAAAGACCAATTGCTGCAGGCAGTGCAGCAATTCGGAAATGCGCAACAAGGAGCTA
TGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

56.41

87.313

0.493

Multiple sequence alignment