Detailed information NTG0988433

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: AAG562_RS04820
• Genome accession: NZ_CP152340
• Coordinates: 1035734..1036996 (+)
• Length: 420 a.a.
• NCBI ID: WP_003282773.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain NCIMB_885
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1030734..1041996

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAG562_RS04800 (AAG562_04800)	-	1031582..1031986 (+)	405	WP_003282777.1	hypothetical protein	-
AAG562_RS04805 (AAG562_04805)	rsmD	1031999..1032613 (-)	615	WP_003282776.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
AAG562_RS04810 (AAG562_04810)	-	1032613..1034154 (-)	1542	WP_003282775.1	pitrilysin family protein	-
AAG562_RS04815 (AAG562_04815)	-	1034147..1035499 (-)	1353	WP_003282774.1	pitrilysin family protein	-
AAG562_RS04820 (AAG562_04820)	pilA	1035734..1036996 (+)	1263	WP_003282773.1	signal recognition particle-docking protein FtsY	Machinery gene
AAG562_RS04825 (AAG562_04825)	ftsE	1036993..1037661 (+)	669	WP_003282770.1	cell division ATP-binding protein FtsE	-
AAG562_RS04830 (AAG562_04830)	ftsX	1037661..1038680 (+)	1020	WP_003282769.1	permease-like cell division protein FtsX	-
AAG562_RS04835 (AAG562_04835)	rpoH	1038791..1039645 (+)	855	WP_342370089.1	RNA polymerase sigma factor RpoH	-

Sequence

Protein

• Length: 420 a.a.
• Molecular weight: 44911.35 Da
• Isoelectric Point: 4.5529

>NTDB_id=988433 AAG562_RS04820 WP_003282773.1 1035734..1036996(+) (pilA) [Stutzerimonas stutzeri strain NCIMB_885]
MFGSNDDKKTPGEPGEKKGLFGWLRKKPQPPVAEQPAAQEESPPHAEQIEAEIEQLAPTAPEVLPEPLIEAEILPEPEPE
PEPEPEPEPEPEPELVPAPVVAAAPVEAPSKLGFFARLKQGLSKTSSSIGEGMASLFLGKKAIDDDLLDELETRLLTADV
GVEATTAIMQNLTRRVSRKELADSGALYTALQEELTGLLKPVEQPMVVDSAKRPYVILVVGVNGVGKTTTIGKLAKKLQL
EGKKVMLAAGDTFRAAAVEQLQVWGERNSIPVIAQHTGADSASVIFDAVQAAKARGIDVLIADTAGRLHTKDNLMEELKK
VRRVMGKLDESAPHEVLLVLDAGTGQNAINQTKQFNQAVELTGLVLTKLDGTAKGGVIFALAKQFGTPIRYIGVGEGIDD
LRTFEADAFVKALFAQQDGA

Nucleotide

• Length: 1263 bp

>NTDB_id=988433 AAG562_RS04820 WP_003282773.1 1035734..1036996(+) (pilA) [Stutzerimonas stutzeri strain NCIMB_885]
ATGTTTGGTTCCAACGACGACAAGAAGACGCCGGGCGAGCCCGGTGAAAAGAAAGGCCTGTTCGGCTGGCTGCGCAAGAA
GCCGCAACCCCCGGTGGCCGAACAGCCTGCTGCGCAGGAAGAAAGCCCCCCGCATGCGGAGCAAATCGAGGCAGAGATCG
AGCAGCTGGCGCCCACAGCGCCCGAGGTATTGCCCGAGCCGCTCATCGAAGCTGAAATACTGCCAGAGCCAGAGCCAGAG
CCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCGGAATTGGTGCCTGCCCCAGTTGTCGCGGCGGCACCCGTCGA
AGCGCCGAGCAAGCTGGGCTTCTTTGCCCGCCTCAAGCAGGGGCTGTCCAAGACCAGCTCCAGCATCGGCGAAGGCATGG
CCAGCCTGTTCCTCGGCAAGAAGGCCATCGACGATGATCTGCTCGACGAGCTGGAAACCCGCCTGCTGACAGCCGACGTC
GGCGTCGAGGCGACCACCGCGATCATGCAGAACCTCACGCGCCGCGTTTCGCGCAAGGAACTGGCCGATAGCGGGGCGCT
CTATACCGCGCTGCAGGAAGAACTCACCGGTCTGCTCAAGCCCGTCGAGCAGCCTATGGTGGTCGATAGTGCCAAGCGCC
CTTACGTGATCTTGGTGGTCGGCGTGAACGGTGTCGGCAAAACGACCACGATCGGCAAGCTGGCCAAGAAGCTGCAGCTC
GAAGGCAAGAAGGTCATGCTTGCCGCCGGAGACACCTTCCGCGCCGCGGCGGTTGAACAATTGCAGGTGTGGGGCGAGCG
CAACAGCATTCCGGTCATCGCTCAGCACACCGGTGCCGACTCTGCCTCGGTGATCTTCGATGCGGTGCAGGCGGCCAAGG
CGAGGGGCATCGACGTGCTGATCGCTGATACCGCGGGCCGTCTGCATACCAAGGACAACCTGATGGAGGAGCTGAAGAAG
GTCCGTCGGGTGATGGGCAAGCTCGACGAGTCGGCTCCCCACGAAGTCCTGCTGGTACTCGACGCCGGCACTGGCCAGAA
CGCCATCAACCAGACCAAGCAGTTCAACCAGGCAGTCGAGCTGACCGGCCTGGTGCTGACCAAGCTCGACGGCACCGCCA
AGGGCGGTGTGATCTTCGCCCTGGCCAAGCAGTTCGGCACGCCGATCCGCTACATCGGCGTCGGCGAGGGAATCGACGAC
CTGCGCACTTTCGAGGCAGATGCCTTCGTCAAGGCACTCTTCGCCCAACAGGACGGCGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (130-195)

• SRP54-type protein, GTPase domain (SRP54) (215-414)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.931	100	0.49