Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | ACODFA_RS05030 | Genome accession | NZ_CP184642 |
| Coordinates | 1035188..1035553 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain 0211 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1030188..1040553
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACODFA_RS05000 (ACODFA_05000) | pyrR | 1030810..1031322 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| ACODFA_RS05005 (ACODFA_05005) | ruvX | 1031434..1031868 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| ACODFA_RS05010 (ACODFA_05010) | - | 1031868..1032437 (-) | 570 | WP_003084577.1 | YqgE/AlgH family protein | - |
| ACODFA_RS05015 (ACODFA_05015) | - | 1032486..1033379 (-) | 894 | WP_003084580.1 | TonB family protein | - |
| ACODFA_RS05020 (ACODFA_05020) | gshB | 1033526..1034479 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| ACODFA_RS05025 (ACODFA_05025) | pilG | 1034734..1035141 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| ACODFA_RS05030 (ACODFA_05030) | pilH | 1035188..1035553 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| ACODFA_RS05035 (ACODFA_05035) | - | 1035604..1036140 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| ACODFA_RS05040 (ACODFA_05040) | pilJ | 1036225..1038273 (+) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| ACODFA_RS05045 (ACODFA_05045) | pilK | 1038334..1039209 (+) | 876 | WP_003084594.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=988149 ACODFA_RS05030 WP_003084587.1 1035188..1035553(+) (pilH) [Pseudomonas aeruginosa strain 0211]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=988149 ACODFA_RS05030 WP_003084587.1 1035188..1035553(+) (pilH) [Pseudomonas aeruginosa strain 0211]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAGTTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAGTTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |