Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AAB158_RS06270 Genome accession   NZ_CP152291
Coordinates   1298368..1298550 (+) Length   60 a.a.
NCBI ID   WP_034314525.1    Uniprot ID   A0A223EEA0
Organism   Peribacillus frigoritolerans strain IMGN5     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1293368..1303550
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAB158_RS06255 (AAB158_06255) - 1295971..1296162 (-) 192 WP_076367140.1 YjzD family protein -
  AAB158_RS06260 (AAB158_06260) - 1296459..1297181 (+) 723 WP_342615269.1 hydrolase -
  AAB158_RS06265 (AAB158_06265) - 1297284..1298114 (+) 831 WP_342615270.1 hypothetical protein -
  AAB158_RS06270 (AAB158_06270) comZ 1298368..1298550 (+) 183 WP_034314525.1 ComZ family protein Regulator
  AAB158_RS06275 (AAB158_06275) - 1298591..1298815 (-) 225 WP_342615271.1 hypothetical protein -
  AAB158_RS06280 (AAB158_06280) - 1299018..1299953 (+) 936 WP_192203707.1 beta-ketoacyl-ACP synthase III -
  AAB158_RS06285 (AAB158_06285) fabF 1300004..1301242 (+) 1239 WP_192203708.1 beta-ketoacyl-ACP synthase II -
  AAB158_RS06290 (AAB158_06290) - 1301381..1302148 (+) 768 WP_192203709.1 DUF2268 domain-containing putative Zn-dependent protease -
  AAB158_RS06295 (AAB158_06295) - 1302257..1303012 (+) 756 WP_192208171.1 YjbA family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6845.97 Da        Isoelectric Point: 4.4566

>NTDB_id=988098 AAB158_RS06270 WP_034314525.1 1298368..1298550(+) (comZ) [Peribacillus frigoritolerans strain IMGN5]
MSSDKTLEFMGIAMKYFPEAKAKLEASGIPFSMEMAEPFMELFKSVMQEAYELGKQDAQR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=988098 AAB158_RS06270 WP_034314525.1 1298368..1298550(+) (comZ) [Peribacillus frigoritolerans strain IMGN5]
ATGAGTTCAGATAAAACTCTTGAATTTATGGGAATCGCCATGAAATACTTCCCAGAGGCTAAAGCGAAGCTTGAAGCAAG
CGGGATTCCATTCTCAATGGAGATGGCAGAGCCATTCATGGAGCTTTTTAAAAGCGTAATGCAAGAAGCTTATGAGCTTG
GCAAACAAGATGCCCAGCGTTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A223EEA0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

64.407

98.333

0.633

Multiple sequence alignment