Detailed information NTG0987045

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: ACOCJD_RS06625
• Genome accession: NZ_CP184567
• Coordinates: 1290043..1291125 (-)
• Length: 360 a.a.
• NCBI ID: WP_014532468.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain CBTW2018008
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1285043..1296125

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACOCJD_RS06605 (ACOCJD_06605)	-	1285637..1285756 (-)	120	WP_031774844.1	hypothetical protein	-
ACOCJD_RS06610 (ACOCJD_06610)	secA	1285798..1288329 (-)	2532	WP_000506529.1	preprotein translocase subunit SecA	-
ACOCJD_RS06615 (ACOCJD_06615)	hpf	1288743..1289315 (-)	573	WP_000617735.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
ACOCJD_RS06620 (ACOCJD_06620)	-	1289376..1290050 (-)	675	WP_001057962.1	ComF family protein	-
ACOCJD_RS06625 (ACOCJD_06625)	comFA	1290043..1291125 (-)	1083	WP_014532468.1	DEAD/DEAH box helicase	Machinery gene
ACOCJD_RS06630 (ACOCJD_06630)	fakB1	1291489..1292355 (-)	867	WP_000686345.1	fatty acid kinase binding subunit FakB1	-
ACOCJD_RS06635 (ACOCJD_06635)	-	1292499..1293140 (+)	642	WP_000192949.1	YigZ family protein	-
ACOCJD_RS06640 (ACOCJD_06640)	-	1293304..1294359 (-)	1056	WP_000258150.1	glycosyltransferase family 4 protein	-
ACOCJD_RS06645 (ACOCJD_06645)	gdpS	1294677..1295747 (+)	1071	WP_000460983.1	GGDEF domain-containing protein GdpS	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 42024.50 Da
• Isoelectric Point: 9.6802

>NTDB_id=987045 ACOCJD_RS06625 WP_014532468.1 1290043..1291125(-) (comFA) [Staphylococcus aureus strain CBTW2018008]
MDNVTRYKITESSQSSSQAYYHLSFELSEQQSYASEHIVRAIRMRQTILLYAVTGAGKTEMMFQGIQYARRQGDNIAIVS
PRVDVVVEISKRIKDAFLNEDIDILHQQSSQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKSLQQALKSSSK
IEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNNKIQKMLYRILQDQINNQRYTLVFFNNIETM
IKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGQFDVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKL
ECPTGKVLFFHEGVSMNMIQAKKEIQKMNKLALKRGWIDE

Nucleotide

• Length: 1083 bp

>NTDB_id=987045 ACOCJD_RS06625 WP_014532468.1 1290043..1291125(-) (comFA) [Staphylococcus aureus strain CBTW2018008]
ATGGATAATGTAACAAGATATAAAATAACAGAAAGTTCGCAAAGTTCATCACAAGCATATTATCATCTCTCATTTGAATT
GTCGGAACAACAGTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAATGAGACAAACGATTTTGTTATATGCAGTAA
CAGGAGCAGGTAAGACAGAAATGATGTTCCAAGGCATTCAATATGCAAGACGACAGGGAGATAATATAGCTATTGTGTCA
CCACGTGTAGATGTTGTTGTAGAAATTAGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCA
GCAATCAAGTCAACAATTTGAAGGGCATTTTGTTGTATGCACAGTGCATCAACTTTACCGATTCAAACAGCACTTTGATA
CTATTTTTATTGATGAAGTCGATGCCTTTCCTTTATCAATGGATAAAAGTTTACAACAAGCATTGAAGTCATCTTCTAAA
ATTGAACATGCAACGATTTATATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATATAATTAA
ATTGCCAGCTCGCTTTCATAAAAAATCACTTCCAGTTCCTAAATATCGCTATTTCAAACTTAATAATAATAAGATTCAGA
AAATGTTATATCGAATTTTACAAGATCAAATTAATAATCAACGTTATACACTGGTGTTTTTTAACAATATAGAAACAATG
ATTAAAACATTTTCGGTTTATAAGCAGAAAATTACTAAATTAACATATGTCCATAGCGAGGATGTTTTTCGCTTTGAAAA
AGTTGAACAATTAAGGAATGGACAATTCGATGTCATTTTTACTACGACAATATTAGAACGTGGATTTACAATGGCAAATT
TAGATGTTGTTGTTATCGATGCACATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGACGAAAATTA
GAATGTCCTACTGGAAAAGTATTGTTTTTTCATGAAGGTGTAAGTATGAATATGATTCAAGCTAAAAAAGAGATTCAAAA
GATGAACAAATTAGCATTAAAAAGAGGTTGGATTGATGAATAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (215-318)

• Type III restriction enzyme, res subunit (ResIII) (25-173)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	39.233	94.167	0.369