Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NYE63_RS26605 Genome accession   NZ_CP152053
Coordinates   5424608..5425558 (-) Length   316 a.a.
NCBI ID   WP_076368205.1    Uniprot ID   A0A9X8WKJ9
Organism   Peribacillus sp. FSL E2-0159     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 5419608..5430558
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE63_RS26590 (NYE63_26585) - 5421756..5422706 (-) 951 WP_342603415.1 siderophore ABC transporter substrate-binding protein -
  NYE63_RS26595 (NYE63_26590) - 5422916..5423674 (-) 759 WP_342603416.1 ABC transporter ATP-binding protein -
  NYE63_RS26600 (NYE63_26595) - 5423668..5424615 (-) 948 WP_342603417.1 iron chelate uptake ABC transporter family permease subunit -
  NYE63_RS26605 (NYE63_26600) ceuB 5424608..5425558 (-) 951 WP_076368205.1 ABC transporter permease Machinery gene
  NYE63_RS26610 (NYE63_26605) - 5425824..5426165 (+) 342 WP_342603418.1 DUF1450 domain-containing protein -
  NYE63_RS26615 (NYE63_26610) - 5426385..5428034 (+) 1650 WP_342603419.1 M14 family metallocarboxypeptidase -
  NYE63_RS26620 (NYE63_26615) shc 5428203..5430098 (+) 1896 WP_342603420.1 squalene--hopene cyclase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34894.21 Da        Isoelectric Point: 9.5025

>NTDB_id=987035 NYE63_RS26605 WP_076368205.1 5424608..5425558(-) (ceuB) [Peribacillus sp. FSL E2-0159]
MKIRYLVMALIVLSFTSLFIGVKDITPLDLLDLSDDKVQIMLQSRFPRMVTIVIAGIVMSISGLIMQQLSRNKFVSPTTA
GTMDSARLGLLLAIIIFPSAALIEKMAFAFIFALAGTFLFMKILDQVKYKDTIFIPLVGLMFGNIVGSISTFFAYKYDLI
QSLNTWMNGDFSMIMSGRYELIYVSIPLVILAYFFANKFTVAGMGEEFAINLGLNYKLIVNFGLIIVALSSTVVLLTVGT
IPFIGLIVPNIVSLYLGDNLKKSLSHTALLGAVFLLICDILGRILIYPFEIPIGLVVGVIGSAVFIYLILRRKAYE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=987035 NYE63_RS26605 WP_076368205.1 5424608..5425558(-) (ceuB) [Peribacillus sp. FSL E2-0159]
ATGAAGATAAGATATTTAGTCATGGCGTTAATTGTTTTATCATTTACGTCATTATTCATTGGTGTAAAGGATATTACCCC
CCTGGATTTATTGGATCTAAGTGATGATAAAGTGCAAATCATGCTGCAAAGCCGTTTCCCCAGAATGGTGACCATAGTCA
TTGCCGGTATTGTAATGAGTATAAGCGGTCTGATCATGCAGCAATTGAGCCGCAATAAATTTGTATCCCCGACGACTGCC
GGAACCATGGATTCTGCAAGGCTTGGACTTCTTCTTGCCATTATCATTTTTCCATCGGCAGCACTTATTGAGAAAATGGC
ATTCGCTTTCATATTCGCTTTGGCAGGTACATTCTTGTTCATGAAAATTCTTGATCAAGTGAAATATAAGGATACGATTT
TCATTCCATTGGTTGGTTTGATGTTTGGTAATATCGTCGGATCCATCTCGACTTTCTTTGCCTATAAATATGATTTGATT
CAAAGCCTCAACACTTGGATGAATGGGGATTTCTCGATGATCATGTCGGGAAGGTACGAACTTATATATGTAAGTATCCC
TCTGGTCATTCTCGCATACTTCTTTGCCAATAAATTCACTGTGGCAGGGATGGGTGAGGAGTTTGCTATCAATCTAGGAC
TCAATTATAAGCTTATAGTCAATTTTGGGTTGATCATCGTGGCATTATCCTCCACTGTCGTTTTGTTAACGGTGGGAACG
ATTCCTTTCATAGGATTGATCGTACCAAATATTGTATCCCTTTACCTTGGTGACAATTTGAAAAAGAGTCTTTCTCATAC
AGCATTACTAGGGGCAGTATTCCTATTGATCTGCGATATTCTGGGCAGGATCCTCATATATCCATTTGAAATCCCGATCG
GACTCGTGGTTGGTGTCATAGGAAGCGCCGTATTTATCTATCTGATACTGAGGAGAAAGGCATATGAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50

100

0.5

Multiple sequence alignment