Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACAK34_RS05525 Genome accession   NZ_AP031582
Coordinates   1151399..1152340 (+) Length   313 a.a.
NCBI ID   WP_001210785.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain JUNP499     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1146399..1157340
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACAK34_RS05515 (JUNP499_1105) basA 1146819..1148666 (+) 1848 WP_000910243.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -
  ACAK34_RS05520 (JUNP499_1106) basB 1148737..1150767 (-) 2031 WP_000939841.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  ACAK34_RS05525 (JUNP499_1107) ceuB 1151399..1152340 (+) 942 WP_001210785.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  ACAK34_RS05530 (JUNP499_1108) bauC 1152340..1153287 (+) 948 WP_001223271.1 ferric acinetobactin ABC transporter permease subunit BauC -
  ACAK34_RS05535 (JUNP499_1109) bauE 1153284..1154054 (+) 771 WP_000582116.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  ACAK34_RS05540 (JUNP499_1110) bauB 1154061..1155029 (+) 969 WP_001104132.1 siderophore-binding periplasmic lipoprotein BauB -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 33990.10 Da        Isoelectric Point: 8.6941

>NTDB_id=98702 ACAK34_RS05525 WP_001210785.1 1151399..1152340(+) (ceuB) [Acinetobacter baumannii strain JUNP499]
MRFGLFCIFIILCICSLLLGAEPIQWTTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=98702 ACAK34_RS05525 WP_001210785.1 1151399..1152340(+) (ceuB) [Acinetobacter baumannii strain JUNP499]
ATGCGATTTGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCGTTATTGCTCGGGGCTGAGCCAATACAGTGGAC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATCCCTCGTTTAATCACTATTGTGCTCA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TACCAGTTATTGGCTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTCGCACACCGCTTTACCGTAATTGGTATGGGGGAAGAGATGGCTTCTAGTTTGGGACTCA
GTTATGCAGCTATAGCCGCCATTGGTTTGATACTGGTTGCCATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCGATTGTGGC
TTTGGGTGGGGCATCTCTATTACTGATTTGTGACATTCTTGGCCGCTCAATCATTTACCCATTTGAAGTGCCGATCGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419

Multiple sequence alignment